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. Author manuscript; available in PMC: 2013 Sep 1.
Published in final edited form as: J Child Neurol. 2012 Jul 4;27(9):1164–1173. doi: 10.1177/0883073812448533

Table 1. Testing Various Selective HDAC Inhibitors as Activators of FXN Gene Transcription.

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Quantitative reverse transcriptase polymerase chain reaction was used to measure FXN messenger RNA levels after treatment with 10 μM compound in Friedreich ataxia lymphoid cells. Abbreviations: HDAC, histone deacetylase; PCR, polymerase chain reaction

Target/Class Compound Structure Ki or IC50 FXN transcription
HDAC1/2 graphic file with name nihms473264t1.jpg Ki = 7 nM HDAC1
Ki = 2.5 μM HDAC3
Weakly active
HDAC3 graphic file with name nihms473264t2.jpg Ki = 14 nM HDAC3
Ki = 148 nM HDAC1
Highly active
Class II graphic file with name nihms473264t3.jpg IC50 ∼ 1 μM class II HDACs Inactive
Sirtuins graphic file with name nihms473264t4.jpg IC50 = 100 nM Sirt1
IC50 = 20 μM Sirt2
IC50 = 50 μM Sirt3
Inactive