Table 1. Assembly and gene statistics for the Hortaea werneckii genome.
Coverage | ∼ 110x |
Assembly size (Mb) | 51.6 |
Contigs (bp) | 12 620 |
Contig N50 (bp) | 8 187 |
Contig max (bp) | 71 563 |
Scaffold (bp) | 11 193 |
Scaffold N50 (bp) | 9 268 |
Scaffold max (bp) | 71 563 |
Predicted protein-coding genes | 23 333 |
Predicted proteins with at least one match in InterProScan | 22 164 |
Predicted proteins with blast hits in nr GenBank database (e-value <10−6) | 20 071 |
Predicted proteins annotated with Blast2GO | 16 103 |
GC content (%) | 54 |
GC content in the coding sequence (%) | 56 |
Repeat content (%) | 1.02 |
Retroelements (%) | 0.41 |
DNA transposons (%) | 0.09 |
Simple repeats (%) | 0.22 |
Low complexity (%) | 0.26 |