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. Author manuscript; available in PMC: 2013 Aug 16.
Published in final edited form as: J Proteome Res. 2012 Feb 29;11(4):2261–2271. doi: 10.1021/pr201052x

Table 1. The number of mouse mitochondrial genes that have protein abundance estimates by different methods.

1098 genes identified in MitoCarta database were considered as the mouse mitochondrial genes. Shown in parentheses is the total number of proteins quantified by each method (not only mitochondrial genes) in the proteomic data. SpectrumMill data was taken from [25] which contained quantitative information for mitochondrial genes only.

Method Brainstem Liver
msInspect 611 (1457) 596 (1102)
msBID 566 (1197) 586 (996)
Spectral count 650 (1693) 641 (1267)
SpectrumMill 679 700