TABLE 1.
Positiona | −630 | −580 | −544 | −526 | −518 | −515 | −497 | −489 | −441 | −409 | −297 | −207 | −119 | −108 | −76 | −33 | −6 | +338 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Variant | G > A | G > A | G > A | C > T | C > T | C > T | C > A | G > A | G > T | C > T | A > T | G > A | G > A | C > T | G > A | T > C | C > T | C > T |
fwildb | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0.056 | 0.056 | 0 | 0 | 0 | NA |
fcaptivec | NA | 0 | 0 | 0.13 | 0.13 | 0 | 0.13 | 0 | 0 | NA | 0.19 | 0.063 | 0 | 0 | 0 | 0.13 | 0 | NA |
fblackd | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.58 | 1e | 0 | 0 |
fblue-eyedf | 0.17 | 0.14 | 0.14 | 0 | 0 | 0.14 | 0 | 0.14 | 0.14 | 0.14 | 0 | 0 | 0 | 0 | 0 | 1e | 0.64 | 0.33 |
pa*g | NA | NA | NA | 0.43 | 0.43 | NA | 0.28 | NA | NA | NA | 0.47 | 0.83 | 0.44 | 0.27 | NA | 0.66 | NA | NA |
pb*h | NA | NA | NA | 0.94 | 0.94 | NA | 0.26 | NA | NA | NA | 0.40 | 0.28 | 0.29 | 0.41 | NA | 0.44 | NA | NA |
plemuri | 0.27 | 0.21 | 0.21 | NA | NA | 0.21 | NA | 0.33 | 0.21 | 0.47 | NA | NA | NA | NA | 0.76 | NA | 0.00084 | 0.28 |
Relative to the base pair homologous to human SNP rs12913832.
Frequency of the derived allele in the wild Japanese macaque sample.
Frequency of the derived allele in captive Japanese macaque founders.
Frequency of the derived allele in black lemur founders.
The derived state in macaques (inferred from M. mulatta) is the ancestral state in lemurs (inferred from L. catta).
Frequency of the derived allele in blue-eyed black lemur founders.
P value of Wald association test with CIE a* in Japanese macaques.
P value of Wald association test with CIE b* in Japanese macaques.
P value of Wald association test with lemur species.