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. 2013 May 25;8(2):215–227. doi: 10.4056/sigs.3977691

Table 4. Assignment of AbM4 protein coding genes to COG functional categories.

Code     Value      %age       Descriptor
J     144      8.62       Translation, ribosomal structure and biogenesis
A     0      0.00       RNA processing and modification
K     72      4.31       Transcription
L     84      5.03       Replication, recombination and repair
B     3      0.18       Chromatin structure and dynamics
D     6      0.36       Cell cycle control, cell division, chromosome partitioning
Y     -      -       Nuclear structure
V     23      1.38       Defense mechanisms
T     9      0.54       Signal transduction mechanisms
M     59      3.53       Cell wall/membrane/envelope biogenesis
N     4      0.24       Cell motility
Z     -      -       Cytoskeleton
W     -      -       Extracellular structures
U     11      0.66       Intracellular trafficking, secretion, and vesicular transport
O     38      2.27       Posttranslational modification, protein turnover, chaperones
C     140      8.38       Energy production and conversion
G     38      2.27       Carbohydrate transport and metabolism
E     117      7.00       Amino acid transport and metabolism
F     46      2.75       Nucleotide transport and metabolism
H     82      4.91       Coenzyme transport and metabolism
I     17      1.02       Lipid transport and metabolism
P     58      3.47       Inorganic ion transport and metabolism
Q     9      0.54       Secondary metabolites biosynthesis, transport and catabolism
R     184      11.01       General function prediction only
S     114      6.82       Function unknown
Not defined     413      24.72       No COG category assigned