Table 3. Genome Statistics.
Attribute | Value | % of Total |
---|---|---|
Genome size (bp) | 4,409,302 | 100.00 |
DNA coding region (bp) | 4,062,544 | 92.14 |
DNA G+C content (bp) | 2,364,784 | 53.63 |
Number of scaffolds | 2 | |
Extrachromosomal elements | 0 | |
Total genes | 4,214 | 100.00 |
RNA genes | 45 | 1.07 |
rRNA operons | 2 | |
tRNA genes | 38 | 0.90 |
Protein-coding genes | 4,169 | 98.93 |
Pseudo genes | 30 | 0.71 |
Genes with function prediction | 2,446 | 58.04 |
Genes in paralog clusters | 1,807 | 42.88 |
Genes assigned to COGs | 2,698 | 64.02 |
Genes assigned Pfam domains | 2,897 | 68.75 |
Genes with signal peptides | 508 | 12.06 |
Genes with transmembrane helices | 1,034 | 24.54 |
CRISPR repeats | 0 |