Table 1. Classification and general features of H. halophila SL1 according to the MIGS recommendations [25].
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Current classification | Domain Bacteria | TAS [26] | |
Phylum Proteobacteria | TAS [27] | ||
Class Gammaproteobacteria | TAS [28,29] | ||
Order Chromatiales | TAS [28,30] | ||
Family Ectothiorhodospiraceae | TAS [31] | ||
Genus Halorhodospira | TAS [32-34] | ||
Species Halorhodospira halophila | TAS [32,33] | ||
MIGS-7 | Subspecific genetic lineage | DSM 244T | |
Gram stain | negative | NAS | |
Cell shape | spiral | TAS [1] | |
Motility | motile | TAS [1] | |
Sporulation | non-sporulating | NAS | |
Temperature range | mesophilic | NAS | |
Optimum temperature | 47°C | TAS [1] | |
Carbon source | CO2, succinate, acetate | TAS [35] | |
Energy source | photosynthesis | TAS [1] | |
MIGS-6 | Habitat | salt lake mud | TAS [1] |
MIGS-6.3 | Salinity | Extreme halophile | TAS [1] |
MIGS-22 | Oxygen | anaerobe | TAS [1] |
MIGS-15 | Biotic relationship | free living | NAS |
MIGS-14 | Pathogenicity | none | NAS |
MIGS-4 | Geographic location | Summer Lake, Lake County, OR | TAS [1] |
MIGS-5 | Sample collection time | about 1967 | TAS [1] |
MIGS-4.1 | Latitude | not reported | |
MIGS-4.2 | Longitude | not reported | |
MIGS-4.3 | Depth | not reported | |
MIGS-4.4 | Altitude | not reported |
aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [36]. If the evidence code is IDA, then the property should have been directly observed, for the purpose of this specific publication, for a live isolate by one of the authors, or an expert or reputable institution mentioned in the acknowledgements.