Table 3. Blast results for 9 individual candidate markers.
Clone ID | Accession NO. | Details of homology status | Size (in bp) | Gene length (bp) | Position of tagged transcript | Max Score | Query Coverage%* | E Value* | Max Identity* |
01-F07 | NM_005742.2 | PDIA6 | 272 | 2344 | 742–956 | 388 | 79% | 1e-104 | 99% |
05-G06 | AF151783.1 | MEG3 | 223 | 3768 | 1856–2011 | 289 | 69% | 9e-75 | 100% |
06-D10 | AY349357.1 | SDCCAG3 | 330 | 1134 | 568–840 | 505 | 82% | 1e-139 | 100% |
06-F05 | AL592301.14 | Clone RP11-413M3 on chromosome9 | 223 | 188462 | 89014–89119 | 196 | 47% | 5e-47 | 100% |
08-B08 | FP236383.15 | Clone 507-528H12 on chromosome 21 | 431 | 161389 | 87270–87633 | 669 | 84% | 0.0 | 99% |
10-A12 | BC033178.1 | IGHG3 | 359 | 1780 | 324–616 | 538 | 81% | 1e-149 | 99% |
11-A02 | BC089417.1 | IGHG1 | 335 | 1659 | 424–716 | 484 | 87% | 2e-133 | 95% |
11-B02 | BC050745.1 | NADH dehydrogenase1 | 274 | 2264 | 214–430 | 390 | 79% | 3e-105 | 99% |
12-A02 | AC023235.24 | BAC RP11-484D18 | 263 | 169633 | 121389–121533 | 268 | 55% | 1e-68 | 100% |
Query coverage is percentage of the query length that is included in the aligned segments.
E value is number of alignments that expected by chance with a particular score or better.
Max identity refers to the alignment of the Blast input (query) sequence to its matched (subject) sequence and indicates the maximum percentage of identical nucleotides or amino acids within the noted alignment length.