Table 2. Inconsistent significantly differentially expressed genes between microarray and RNAseq.
Gene | Microarray Log2 Fold Change | Microarray Adjusted Pvalue | RNAseq Log2 Fold Change | RNAseq Adjusted Pvalue |
BMP8A | −1.05 | 8.43E-07 | 2.00 | 1.23E-32 |
CEACAM20 | 1.03 | 1.27E-09 | −1.55 | 3.08E-03 |
CHGA | −1.66 | 1.46E-04 | 5.43 | 5.27E-13 |
COL9A1 | −1.43 | 6.01E-04 | 2.76 | 8.04E-07 |
DCD | −3.74 | 1.99E-03 | 6.30 | 4.56E-10 |
GPM6A | −1.36 | 8.41E-04 | 1.56 | 3.13E-04 |
GRIA3 | −1.53 | 1.26E-03 | 1.01 | 3.17E-03 |
GSTA3 | −3.02 | 2.59E-07 | 4.41 | 9.71E-09 |
IGF2 | −1.51 | 1.12E-04 | 1.16 | 1.84E-04 |
KLK11 | −4.60 | 3.66E-04 | 1.10 | 1.88E-03 |
KRT16 | −2.03 | 1.34E-03 | 2.34 | 1.48E-07 |
KRT6A | −2.93 | 3.51E-05 | 1.52 | 2.68E-03 |
LEMD1 | −3.12 | 7.20E-04 | 1.63 | 7.73E-03 |
LGALS7 | −1.94 | 3.25E-06 | 1.16 | 5.48E-03 |
LY6D | −2.63 | 5.45E-05 | 2.88 | 2.94E-06 |
MT1H | −1.23 | 4.69E-09 | 2.22 | 1.46E-06 |
PLAT | −1.85 | 1.02E-04 | 1.01 | 8.23E-03 |
PLP1 | −2.42 | 1.03E-08 | 1.12 | 4.74E-03 |
PRSS12 | −2.07 | 8.56E-04 | 1.56 | 1.52E-03 |
RLBP1 | −1.05 | 1.34E-04 | 1.49 | 8.72E-03 |
SCN1A | −1.06 | 3.07E-04 | 4.99 | 3.59E-13 |
TNFSF11 | 2.29 | 3.40E-03 | −2.16 | 1.17E-05 |
UCP1 | −1.95 | 7.10E-06 | 2.24 | 2.55E-05 |
UGT2B4 | −2.08 | 3.96E-04 | 4.81 | 1.25E-16 |