Table 1. Summary of mammalian viruses found in ferret fecal material.
Ferret | Housingc | Total no. readsa | Eukaryotic viruses (No. of reads) | Virus in-depthd | Taqmand |
1 | Farm NL | 3981 | Picobirnavirus (2) | FRCoV | |
2 | Farm NL | 10149 | Papillomavirus (3) | FRCoV | |
3 | Farm NL | 5186 | Coronavirus (17) | FRCoV | |
Picobirnavirus (10) | |||||
Kobuvirus (75) | |||||
4 | Farm NL | 8919 | Torque teno virus (3) | ||
5 | Farm NL | 71706 | |||
6 | Farm NL | 7710 | |||
7 | Farm NL | 7344 | |||
8 | Farm NL | 7686 | Aleutian mink disease virus (2) | FRCoV | |
9 | Farm NL | 9576 | |||
10 | Farm NL | 7702 | Aleutian mink disease virus (2) | FRCoV | |
11 | Farm NL | 1149 | |||
12 | Farm NL | 4351 | |||
13 | Farm SE | 4947 | |||
14 | Farm SE | 6560 | |||
15 | Farm SE | 4632 | Coronavirus (116) | FRCoV | |
16 | Farm SE | 5985 | |||
17 | Farm SE | 4766 | Papillomavirus (92) | MpPV1 | MpPV1 |
18 | Farm SE | 4728 | |||
19 | Farm SE | 3641 | Coronavirus (19) | FRCoV | |
Kobuvirus (90) | MpKoV | ||||
20 | Farm SE | 5627 | Kobuvirus (11) | ||
21 | Farm SE | 6091 | Coronavirus (43) | FRCoV | |
Torque teno virus (48) | MpfTTV1 | ||||
22 | Farm SE | 3422 | |||
23 | Farm SE | 706 | |||
24 | Farm SE | 3099 | Coronavirus (22) | FRCoV | |
25 | Household | 6249 | FRCoV | ||
26 | Household | 7745 | Astrovirus (636) | ||
Coronavirus (13) | FRCoV | ||||
Picobirnavirus (3) | |||||
27 | Household | 10002 | |||
28 | Household | 13634 | |||
29 | Household | 4298 | |||
30 | Household | 4886 | Picobirnavirus (9) | ||
Polyomavirus (3) | |||||
31 | Household | 8959 | |||
32 | Household | 8369 | Kobuvirus (4280) | MpKoV32 | MpKoV |
Polyomavirus (2) | |||||
33 | Household | 8459 | Herpesvirus (2) | ||
Kobuvirus (2039) | MpKoV | ||||
Hepevirus (562) | FRHEV | ||||
Coronavirus (35) | FRCoV | ||||
34 | Household | 7116 | FRCoV | ||
35 | Household | 1167 | Hepevirus (898) | FRHEV | |
36 | Household | 9539 | Kobuvirus (50) | MpKoV | |
Parechovirus (71) | MpPeV1 | MpPeV1 | |||
37 | Householdb | 5069 | Astrovirus (1464) | ||
Hepevirus (516) | FRHEV | ||||
38 | Householdb | 13387 | Coronavirus (19) | MpKoV38 | FRCoV |
Kobuvirus (6160) | MpKoV | ||||
39 | Householdb | 9117 | Kobuvirus (3582) | MpKoV39 | MpKoV |
Total no. of trimmed reads that were analyzed.
These animals had diarrhea.
NL, Netherlands; SE, Sweden.
FRCoV, ferret coronavirus; MpPV1, ferret papillomavirus; MpKoV, ferret kobuvirus; FRHEV, ferret hepevirus; MpPeV, ferret parechovirus; MpfTTV, ferret anellovirus.