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. Author manuscript; available in PMC: 2014 Sep 1.
Published in final edited form as: Histochem Cell Biol. 2013 Jul 10;140(3):271–283. doi: 10.1007/s00418-013-1117-6

Table 1.

COG interacting SNAREs and SNARE-interacting (SM) proteins

COG subunit Partner protein organism Detection method* Reference
COG2 Sed5 yeast PD-W (Suvorova et al. 2002)
COG3 Sed5 yeast PD-W, PD-G (Suvorova et al. 2002)
STX5 human Co-IP (Sohda et al. 2010)
YKT6 yeast PD-W (Suvorova et al. 2002)
Gos1 yeast PD-W (Suvorova et al. 2002)
Sec22 yeast PD-W (Suvorova et al. 2002)
GS28 (GOSR1) human Co-IP (Zolov and Lupashin 2005; Sohda et al. 2010)
COG4 Sed5 yeast Y2H, Co-IP (Shestakova et al. 2007)
STX5 human Y2H, Co-IP (Shestakova et al. 2007; Willett et al. 2013; Sohda et al. 2010; Laufman et al. 2009; Laufman et al. 2013; Kudlyk et al. 2013)
STX16 human Co-IP, PD-W (Laufman et al. 2013)
Vti1a human Co-IP, PD-W (Laufman et al. 2013)
GS28 (GOSR1) human Co-IP, PD-W (Laufman et al. 2013)
Sly1 human Co-IP, PD-W (Laufman et al. 2009; Laufman et al. 2013)
Vps45 human Co-IP, PD-W (Laufman et al. 2013)
COG6 STX5 human Y2H, Co-IP (Shestakova et al. 2007; Kudlyk et al. 2013; Laufman et al. 2013)
STX6 human Y2H, PD-W, Co-IP (Laufman et al. 2011; Kudlyk et al. 2013; Willett et al. 2013)
GS27 (GOSR2) human Y2H, Co-IP (Kudlyk et al. 2013)
SNAP29 human Y2H, Co-IP (Willett et al. 2013; Kudlyk et al. 2013)
COG7 STX6 human Co-IP (Laufman et al. 2013)
STX16 human Co-IP (Laufman et al. 2013)
GS28 (GOSR1) human Co-IP (Laufman et al. 2013)
GS15 (BET1L) human Co-IP (Laufman et al. 2013)
Vps45 human Co-IP (Laufman et al. 2013)
COG8 STX5 human Y2H, Co-IP (Willett et al. 2013)
STX16 human Y2H, Co-IP (Laufman et al. 2013; Willett et al. 2013)
GS27 (GOSR2) human Y2H, Co-IP (Willett et al. 2013)
*
Abbreviations used for detection method
  • Y2H – yeast two hybrid
  • Co-IP – co-immunoprecipitation
  • PD-W – pull-down with subsequent Western Blot
  • AC-MS – affinity capture with subsequent mass-speck analysis
  • PD-G – pull-down with subsequent Gel staining
  • PCA – protein fragment complementation assay