Table 3.
Equivalent invariant residues between the HCV template and the Dengue virus polymerase model in the vicinity of the ssRNA fragment or the UTP substrate.
Substrate | ssRNA | UTP | ||||
---|---|---|---|---|---|---|
Interacting invariant RdRp residues | HCV RdRp structure | Dengue virus Model | Motif | HCV RdRp structure | Dengue virus Model | Motif |
D220 | D312 | IV | D318 | D441 | VI | |
D318 | D441 | VI | D319 | D442 | VI | |
D319 | D442 | VI | D220 | D312 | IV | |
N291 | N388 | V | K155 | K247 | II | |
T287 | T384 | V | ||||
R158 | R250 | II | ||||
E143 | E327 | I | ||||
S282 | S379 | V | ||||
K141 | K235 | I | ||||
R168 | R260 | II | ||||
R394 | R515 | Conserved |