Table 3. Data on distribution of Simple Sequence Repeats (SSRs) in seabuckthorn transcriptome.
Data item | Number (%) |
---|---|
Total number of sequences screened | 88297 |
Total number of identified SSRs | 13299 |
Number of sequences containing SSRs | 10980 (12.4) |
Number of sequences containing more than one SSR | 1850 (16.8) |
Number of SSRs present in compound formation | 1099 (8.2) |
Relative distribution of different repeat types | |
Mono-nucleotides | 7502 (56.4) |
Di-nucleotides | 2860 (21.5) |
Tri-nucleotides | 2520 (18.9) |
Tetra-nucleotides | 213 (1.6) |
Penta-nucleotides | 62 (0.46) |
Hexa-nucleotides | 142 (1.06) |