Table 5. Expression changes of milk protein genes during the two stages of lactogenesis.
Gene | Description | TPM (−35 d) | TPM (−7 d) | TPM (3 d) | log2 Ratio (−7/−35) | log2 Ratio (+3/−7) |
gi|31341749|ref|NM_174528.2| | Casein alpha –S2 (CSN1S2) | 22.49 | 304.12 | 10389.3 | 3.76 | 5.09 |
gi|31342165|ref|NM_174378.2| | Lactalbumin alpha (LALBA) | 3.72 | 198.63 | 5224.76 | 5.74 | 4.72 |
gi|31341348|ref|NM_181029.2| | Casein alpha s1 (CSN1S1) | 578.92 | 10599.41 | 80620.84 | 4.19 | 2.93 |
gi|31341343|ref|NM_181008.2| | Casein beta (CSN2) | 735.32 | 12496.16 | 64462.97 | 4.09 | 2.37 |
gi|27881411|ref|NM_174294.1| | Casein kappa (CSN3) | 1390.84 | 4109.25 | 13441.57 | 1.56 | 1.71 |
Note: TPM (Transcripts Per Million clean tags) is a standardized indicator that specifies the number of transcript copies in every one million clean tags.