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. 2013 Aug 21;8(8):e71609. doi: 10.1371/journal.pone.0071609

Table 2. Alphabetical list of peptide precursors, contig expression values and associated Blast matches.

Peptide designation Size (aa) Comp ID Contig ID Size (pb) TPM FPKM BLAST matches
Allatostatin 361 15895_c0_seq1 1444 5.01 4.11 Type A pre-pro-allatostatin (Machrobrachium rosenbergii)
A precursor 06348 760 0.93 3.9 4.4 e-51
Allatostatin 98 40876_c0_seq1 424 1.8 1.48 Type B pre-pro-allatostatin (Pandalopsis japonica)
B precursor - - - - 2.0 e-10
Allatostatin 106 7109_c0_seq1 589 11.08 9.08 Type C pre-pro-allatostatin (Daphnia pulex)
C precursor 10325 501 2.12 8.92 1.96 e-22
α Bursicon 148 25818_c0_seq1 636 3.51 2.88 Bursicon hormone alpha subunit (Callinectes sapidus)
precursor 24449 273 0.58 2.42 9.35 e-72
β Bursicon 137 17391_c0_seq1 701 4.1 3.36 Bursicon hormone beta subunit (Homarus gammarus)
precursor 10676 489 0.8 3.38 1.37 e-64
CCAP 140 20513_c0_seq1 607 4.71 3.86 Crustacean cardioactive peptide (Procambarus clarkii)
precursor 20601 308 0.96 4.05 7.16 e-32
CHH 131 4803_c0_seq2 493 21.75 17.83 CPRP/cHH precursor (Charybdis japonica)
precursor 17526 347 3.57 15 7.43 e-28
CLDH31 154 5480_c0_seq1 619 9.34 7.65 Pre-pro-calcitonin-like diuretic hormone (Homarus
precursor 24873 269 1.33 5.6 americanus) 6.16 e-23
CLDH33 149 5480_c0_seq2 598 11.06 9.06 Pre-pro-calcitonin-like diuretic hormone (Homarus
precursor 17839 342 3.46 14.53 americanus) 2.59 e-44
CLDH56 109 44788_c0_seq1 330 1.31 1.07 corticotropin releasing factor-like protein (R. prolixus)
precursor - - - - 7.61 e-7
Corazonin 92 814_c1_seq4 429 176.02 144.28 Pro-corazonin (Acromyrmex echinatior)
precursor 1 24335 274 35.51 149.34 4.66 e-7
Corazonin 82 814_c1_seq2 667 7.65 6.27 Corazonin preprohormone (Daphnia pulex)
precursor 2 05623 841 1.94 8.18 1.05 e-6
Eclosion 92 673_c2_seq1 1179 121.27 99.4 Eclosion hormone (Amphibalanus amphitrite)
hormone 19560 320 6.82 28.68 1.80 e-13
MIH/VIH1 82 46742_c0_seq1 423 1.39 1.14 Probable molt inhibiting hormone (Jasus lalandii)
- - - - 2.57 e-14
MIH/VIH2 48 - - - - Probable molt inhibiting hormone (Jasus lalandii)
17459 347 2.23 9.36 1.93 e-8
Neuroparsin 103 18741_c0_seq1 382 5.96 4.88 Neuroparsin-A precursor (Caligus rogercresseyi)
1 precursor 17227 351 1.16 4.86 2.63 e-17
Neuroparsin 67 - - - - Putative neuroparsin (Daphnia pulex)
2 precursor 16193 363 0.54 2.27 7.97 e-7
NPF1 90 2304_c0_seq1 732 31.94 26.18 Preproneuropeptide F1 (Litopenaeus vannamei)
precursor 31384 227 9.64 40.52 1.00 e-28
NPF1L 128 2304_c0_seq2 734 10.68 8.75 Preproneuropeptide F2 (Litopenaeus vannamei)
precursor - - - - 2.27 e-47
NPF2 62 8750_c0_seq1 733 12.84 10.53 NPF-like precursor (Nassonia vitripennis)
precursor 07726 643 2.24 9.41 1.25 e-7
PDHLα 87 4981_c0_seq1 415 23.89 19.58 Pigment dispersing hormone (Litopenaeus vannamei)
precursor 05401 870 2.65 11.15 5.09 e-5
PDHLβ1 78 1192_c0_seq2 562 37.32 30.59 Pigment dispersing hormone (Litopenaeus vannamei)
precursor 17681 344 30.05 58.16 1.65 e-10
PDHLβ2 56 1192_c0_seq3 405 53 43.44 Pigment dispersing hormone (Litopenaeus vannamei)
precursor 08747 576 15.73 66.14 1.65 e-10
PDHβ 74 - - - - Pigment dispersing hormone type 2 (Litopenaeus
precursor 33371 218 111.78 470.11 vannamei) 1.54 e-15
RPCH 104 9506_c0_seq2 832 7.48 6.13 Red pigment concentrating hormone (M. rosenbergii)
precursor 06590 737 1.33 5.61 3.82 e-18
SIFamide 69 2588_c0_seq1 1015 18.97 15.55 SIFamide (Procambarus clarkii)
precursor 03910 1128 3.92 16.5 5.75 e-25
sNPF1 257 7638_c0_seq1 502 13.49 11.05 Short neuropeptide F precursor (Aedes aegypti)
precursor 18326 335 2.35 9.89 1.77 e-13
sNPF2 137 - - - - Short neuropeptide F precursor (Aedes aegypti)
precursor 03109 791 2.19 9.21 9.38 e-11
Tachykinin 205 4591_c0_seq3 1933 14.61 11.97 Preprotachykinin (Panulirus interruptus)
precursor 03739 1170 4.47 18.8 6.56 e-38

comp ID: sequences assembled with Trinity.contig ID (italic) sequences assembled with Newbler. Size (aa): deduced coding sequences. Size (pb): comp or contig sizes in pair bases. TPM  =  Transcripts Per Million. FPKM  =  Fragments Per Kilobase of exon per Million fragments mapped. Bold values are over the TPM or FPKM averages. Underlined peptides have been characterised by mass.