Table 4.
Ec ProRS | kcat/KM (relative) | Fold-Decrease | ΔΔG (kcal/mol) |
---|---|---|---|
WT | 1 | 1 | - |
D198A | 0.18 | 5.5 | 1.0 |
E218Ac | 0.71 | 1.4 | 0.20 |
E234A | 0.48 | 2.1 | 0.43 |
H302A | 0.45 | 2.2 | 0.46 |
N305A | 0.014 | 70 | 2.5 |
G412A | 0.14 | 7.1 | 1.2 |
F415A | 0.014 | 70 | 2.5 |
H302A/G412A | 0.18 | 5.5 | 1.0 |
N305A/G412A | ND | - | - |
E218A/N305A | ND | - | - |
Aminoacylation assays were performed under conditions where the initial rates were proportional to RNA concentrations. This indicated that V0/[S] was an accurate reflection of kcat/KM. The relative kcat/KM values were normalized and set to 1 for WT. ΔΔG was calculated according to the equation ΔΔG = −RT ln (fold-decrease of kcat/KM), where R is the gas constant, 1.986 cal K−1 mol−1 and T is 298 K. ND indicates not detectable under the experimental conditions used.
Data is from reference (16).