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. Author manuscript; available in PMC: 2014 Jun 25.
Published in final edited form as: Biochemistry. 2013 Jun 17;52(25):4399–4412. doi: 10.1021/bi400079h

Table 4.

Kinetic parameters for aminoacylation by WT and mutant variants of Ec ProRSa

Ec ProRS kcat/KM (relative) Fold-Decrease ΔΔG (kcal/mol)
WT 1 1 -
D198A 0.18 5.5 1.0
E218Ac 0.71 1.4 0.20
E234A 0.48 2.1 0.43
H302A 0.45 2.2 0.46
N305A 0.014 70 2.5
G412A 0.14 7.1 1.2
F415A 0.014 70 2.5
H302A/G412A 0.18 5.5 1.0
N305A/G412A ND - -
E218A/N305A ND - -
a

Aminoacylation assays were performed under conditions where the initial rates were proportional to RNA concentrations. This indicated that V0/[S] was an accurate reflection of kcat/KM. The relative kcat/KM values were normalized and set to 1 for WT. ΔΔG was calculated according to the equation ΔΔG = −RT ln (fold-decrease of kcat/KM), where R is the gas constant, 1.986 cal K−1 mol−1 and T is 298 K. ND indicates not detectable under the experimental conditions used.

b

Data is from reference (16).