Skip to main content
. 2013 Aug 22;9(8):e1003585. doi: 10.1371/journal.pgen.1003585

Table 5. Minor allele effects on FEV1 of low-frequent and common SNPs in the SERPINA gene cluster in ever-smokers undergoing lung resection.

SNP MAF Imp-r2 Allele Effect (L) P MAF Imp-r2 Allele Effect (L) P
Groningen (N = 133) University of British Columbia, UBC (N = 264)
rs17580 (PI S) 0.055 0.72 0.42 0.10 0.079 0.76 −0.15 0.29
rs28929474 (PI Z) 0.123 0.98 −0.68 <0.001 0.032 0.98 −0.81 <0.0001
rs4905179 0.299 1.00 −0.22 0.04 0.249 naa −0.23 0.002
rs4905179, adjusted for PI S and Z −0.07 0.65 −0.08 0.36
rs3748312 0.233 0.95 −0.34 0.008 0.148 0.94 −0.16 0.07
rs3748312, adjusted for PI S and Z 0.16 0.37 0.09 0.35

Abbreviations: FEV1, forced expiratory volume in one second; MAF, minor allele frequency; SNP, single nucleotide polymorphism.

Imp-r2 is an indicator for imputation quality. The analyses were adjusted for age, sex and height.

a

Rs4905179 was genotyped in UBC.