Table 5. Minor allele effects on FEV1 of low-frequent and common SNPs in the SERPINA gene cluster in ever-smokers undergoing lung resection.
SNP | MAF | Imp-r2 | Allele Effect (L) | P | MAF | Imp-r2 | Allele Effect (L) | P |
Groningen (N = 133) | University of British Columbia, UBC (N = 264) | |||||||
rs17580 (PI S) | 0.055 | 0.72 | 0.42 | 0.10 | 0.079 | 0.76 | −0.15 | 0.29 |
rs28929474 (PI Z) | 0.123 | 0.98 | −0.68 | <0.001 | 0.032 | 0.98 | −0.81 | <0.0001 |
rs4905179 | 0.299 | 1.00 | −0.22 | 0.04 | 0.249 | naa | −0.23 | 0.002 |
rs4905179, adjusted for PI S and Z | −0.07 | 0.65 | −0.08 | 0.36 | ||||
rs3748312 | 0.233 | 0.95 | −0.34 | 0.008 | 0.148 | 0.94 | −0.16 | 0.07 |
rs3748312, adjusted for PI S and Z | 0.16 | 0.37 | 0.09 | 0.35 |
Abbreviations: FEV1, forced expiratory volume in one second; MAF, minor allele frequency; SNP, single nucleotide polymorphism.
Imp-r2 is an indicator for imputation quality. The analyses were adjusted for age, sex and height.
Rs4905179 was genotyped in UBC.