Table 2. The arrangement and length (in bp) of protein-encoding genes and rRNA genes of P. cervi and other digenean species available in GenBank™.
Species | Accession number | Length (bp) | Order and Length (bp) of protein-coding genes and rRNA genes | |||||||||||||
Paramphist omum cervi | KF475773 | 14,014 | cox3 645 | cytb1113 | nad4L 264 | nad4 1281 | atp6 516 | nad2873 | nad1897 | nad3 357 | cox1 1533 | rrnL 992 | rrnS 754 | cox2579 | nad6 453 | nad51581 |
Fasciola hepatica | NC_002546 | 14,462 | cox3 642 | cytb1113 | nad4L 273 | nad4 1272 | atp6 519 | nad2867 | nad1897 | nad3 357 | cox1 1533 | rrnL 987 | rrnS 766 | cox2603 | nad6 453 | nad51569 |
Paragonimus westermani | AF219379 | 14,9651 | cox3 645 | cytb1119 | nad4L 258 | nad4 1263 | atp6 513 | nad2867 | nad1903 | nad3 357 | cox1 1536 | rrnL 987 | rrnS 744 | cox2600 | nad6 453 | nad51584 |
Opisthorchis felineus | NC_011127 | 14,277 | cox3 645 | cytb1116 | nad4L 264 | nad4 1278 | atp6 516 | nad2870 | nad1903 | nad3 357 | cox1 1563 | rrnL 994 | rrnS 779 | cox2639 | nad6 462 | nad51605 |
Clonorchis sinensis | NC_012147 | 13,875 | cox3642 | cytb1113 | nad4L 264 | nad4 1278 | atp6 516 | nad2873 | nad1903 | nad3 357 | cox1 1560 | rrnL 998 | rrnS 779 | cox2636 | nad6 462 | nad51605 |
Trichobilharzia regenti | NC_009680 | 14,838 | cox3651 | cytb1107 | nad4L 261 | nad4 1254 | atp6516 | nad2825 | nad1876 | nad3 363 | cox1 1536 | rrnL 1016 | rrnS 772 | cox2585 | nad6459 | nad51599 |
Schistosoma mekongi | NC_002529 | 14,0721 | cox3654 | cytb1119 | nad4L 264 | nad4 1272 | atp6709 | nad2852 | nad1888 | nad3 363 | cox1 1533 | rrnL 1019 | rrnS 709 | cox2637 | nad6462 | nad51593 |
S. japonicum | NC_002544 | 14,0851 | cox3645 | cytb1116 | nad4L 264 | nad4 1275 | atp6519 | nad2855 | nad1891 | nad3 360 | cox1 1527 | rrnL 1004 | rrnS 744 | cox2600 | nad6459 | nad51587 |
S. turkestanicum | HQ283100 | 14,755 | cox3561 | cytb1110 | nad4L 264 | nad4 1263 | atp6513 | nad2837 | nad1918 | nad3 363 | rrnL 1047 | cox11629 | rrnS 761 | cox2585 | nad6450 | nad51569 |
S. haematobium | NC_008074 | 15,003 | cox3666 | cytb1104 | nad4L 261 | nad4 1266 | nad3369 | nad1882 | cox11542 | rrnL 1055 | rrnS 762 | cox2597 | nad6474 | atp6524 | nad2840 | nad51584 |
S. mansoni | NC_002545 | 14,4151 | cox3654 | cytb1095 | nad4L 261 | nad4 1260 | nad3363 | nad1879 | cox11533 | rrnL 1055 | rrnS 752 | cox2594 | nad6450 | atp6752 | nad2840 | nad51584 |
S. spindale | NC_008067 | 16,901 | cox3666 | cytb1095 | nad4L 255 | nad4 1263 | nad3369 | nad1876 | cox11548 | rrnL 1056 | rrnS 760 | cox2603 | nad6468 | atp6760 | nad2840 | nad51587 |
Note that lengths given in GenBank for these entries do not include an undetermined portion of the long non-coding region.