Table 6.
MicroRNAs belonging to modules blue and purple and their negatively-correlated genes
Modules | miRNA family | Genes within modules negatively correlated with miRNA1 |
---|---|---|
Blue |
Let-7 |
CARS |
|
miR-124 |
STRA13, IER3IP1, HSBP1, CCNL2, LOC100133632, SYTL4 |
|
miR-130 |
STRA13, LOC727762 |
|
miR-154 |
PCM1 |
|
miR-202 |
SCARB2, STRA13, TFAM |
|
miR-204 |
STRA13 |
|
miR-467 |
STRA13, MRPS7, STRA13, NUCKS1, PSMC3, FDPS, DNAJC12, WBSCR22 |
Purple |
miR-17 |
BEND5, PTP4A2, BEND5 |
|
miR-185 |
SEMA6C, Nfia, RSU1, USP11, SEMA6C, ZNF704 |
|
miR-221 |
RNF220, CHD8, PI4KA, FLJ25076, DVL2, FZD8, Sh2b1, LOC100157073 |
|
miR-324 |
CIC, UBE2E1, UBE2V1, MYLPF, UBAP1 |
|
miR-362 |
IGFBP5, HERC1, PSMB3 |
|
miR-500 |
IGFBP5, UBE2E1, HERC1 |
miR-542 | RSU1 |
1genes predicted as potential targets of the corresponding miRNAs are shown in bold.