Table 1.
Features of the Nannochloropsis organelle genomes (Plastid/Mitochondria)
| N. oceanica IMET1 | N. oceanica CCMP531 | N. salina CCMP537 | N. gaditana CCMP527 | N. oculata CCMP525 | N. limnetica CCMP505 | N. granulata CCMP529 | |
|---|---|---|---|---|---|---|---|
|
Size (bp) |
117,548/38,057 |
117,634/38,057 |
114,883/41,907 |
114,867/42,206 |
117,463/38,444 |
117,806/38,543 |
117,672/38,791 |
|
LSC length (bp) |
57,360/- |
57,387/- |
56,882/- |
56,925/- |
57,287/- |
57,444/- |
57,352/- |
|
SSC length (bp) |
45,235/- |
45,240/- |
47,364/- |
47,698/- |
45,227/- |
45,259/- |
45,247/- |
|
IR length (bp) |
7,485/- |
7,496/- |
5,320/- |
5,122/- |
7,476/- |
7,549/- |
7,527/- |
|
Number of genes |
160/63 |
160/63 |
156/64 |
156/64 |
160/63 |
160/63 |
160/63 |
|
Protein-coding genes |
126/35 |
126/35 |
123/36 |
123/36 |
126/35 |
126/35 |
126/35 |
|
Structure RNAs |
34/28 |
34/28 |
33/28 |
33/28 |
34/28 |
34/28 |
34/28 |
|
GC content (%) |
33.6/31.9 |
33.6/31.9 |
33.1/31.4 |
33.0/31.4 |
33.4/31.8 |
33.5/31.7 |
33.4/32.0 |
| Coding regions (%) | 83.5/87.5 | 83.4/87.5 | 83.6/81.4 | 83.8/80.9 | 83.5/84.7 | 83.7/84.6 | 84.5/84.1 |