Table 3.
Major transcription factor families identified by conserved domain annotation
|
Transcription factors identified by KOG/InterPro/GO annotation in Fav1 | |
|---|---|
| Sequence description | Sequences(n) |
| CBF |
1 |
| Transcriptional Coactivator P50 |
1 |
| Transcriptional Coactivator P100 |
6 |
| Transcriptional Coactivator CAPER |
2 |
| Homeobox domain |
7 |
| HSF-type DNA-binding |
1 |
| P53 DNA-binding domain |
2 |
| NF-X1-type zinc finger protein |
3 |
| Dimerization partner (TDP) |
2 |
| Fork head |
15 |
| Basic region leucine zipper & bZIP |
6 |
| Helix-loop-helix DNA binding domain |
12 |
| Myb-like DNA-binding domain |
3 |
| Zinc finger C2H2 type |
3 |
| Zinc finger MIZ type |
1 |
| HMG box |
12 |
| TBOX |
5 |
| ETS domain |
12 |
| MADS domain | 4 |