Table 2.
Nr annotations and RPKM values of 16 selected candidate RNAi target genes in alimentary canal of grain aphid
| Unigene no. | Nr-annotation | RPKM value of the unigene in Chuli | RPKM value of the unigene in Duizhao | Log 2 ratio (Chuli RPKM/Duizhao RPKM) |
|---|---|---|---|---|
| Unigene_6994 |
Synaptotagmin 4 [Acyrthosiphon pisum] |
54.8647 |
35.322 |
0.64 |
| Unigene_ 8273 |
Similar to cuticular protein CPG12 [Acyrthosiphon pisum] |
1454.892 |
641.2085 |
1.18 |
| Unigene_ 8279 |
Similar to CG10625 [Acyrthosiphon pisum] |
1967.559 |
554.559 |
1.83 |
| Unigene_11975 |
Hypothetical repeat protein [Leishmania infantum] |
17.2449 |
4.6812 |
1.88 |
| Unigene_21088 |
cytochrome c oxidase subunit VIIc precursor [Acyrthosiphon pisum] |
3463.178 |
7555.03 |
−1.13 |
| Unigene_21789 |
No orthologs identified |
1987.456 |
886.7044 |
1.16 |
| Unigene_23028 |
Similar to zinc finger protein [Acyrthosiphon pisum] |
6.0578 |
0.0 |
Only in Chuli |
| Unigene_23042 |
Similar to AGAP007992-PA, partial sequence [Acyrthosiphon pisum] |
6.0346 |
0.0 |
Only in Chuli |
| Unigene_23235 |
Similar to defective proboscis extension response [Tribolium castaneum] |
5.4287 |
0.0 |
Only in Chuli |
| Unigene_ 26956 |
No orthologs identified |
0.0 |
98.1775 |
Only in Duizhao |
| Unigene_ 27357 |
Similar to proteophosphoglycan ppg1 [Acyrthosiphon pisum] |
1481.846 |
525.2179 |
1.49 |
| Unigene_ 27882 |
Similar to neurofilament, heavy polypeptide isoform 2 [Acyrthosiphon pisum] |
1602.747 |
751.6207 |
1.09 |
| Unigene_ 28447 |
No orthologs identified |
1861.09 |
494.6134 |
1.91 |
| Unigene_28469 |
No orthologs identified |
2775.923 |
174.3591 |
3.99 |
| Unigene_ 28555 |
ACYPI002010 [Acyrthosiphon pisum] |
2321.885 |
681.4342 |
1.76 |
| Unigene_ 29698 | No orthologs identified | 0.0 | 98.4885 | Only in Duizhao |