Table 4.
Assembly genes implicated in ginsenosides biosynthesis
| Gene | Alias | EC | KO | Annotation |
|---|---|---|---|---|
| Pq9090 |
AACT |
2.3.1.9 |
K00626 |
Acetyl-CoA acetyltransferase |
| Pq24050 |
HMGS |
2.3.3.10 |
K01641 |
HMG-CoA synthase |
| Pq28460 |
HMGR |
1.1.1.34 |
K00021 |
HMG-CoA reductase (NADPH) |
| Pq48060 |
MK |
2.7.1.36 |
K00869 |
Mevalonate kinase |
| Pq106070 |
PMK |
2.7.4.2 |
K00938 |
Phosphomevalonate kinase, mvaK2 |
| Pq40790 |
MDD |
4.1.1.33 |
K01597 |
Mevalonate diphosphate decarboxylase |
| Pq10790 |
IDI |
5.3.3.2 |
K01823 |
Isopentenyl-diphosphate-isomerase |
| Pq57960 |
FPS/DMAPP |
2.5.1.1 |
K14066 |
Farnesyl diphosphate synthase/IPP-dimethylallyltransferase |
| Pq25790 |
FPS/DMAPP |
2.5.1.1.1/10 |
K00787 |
Farnesyl diphosphate synthase/IPP-dimethylallyltransferase |
| Pq130580 |
FPS/DMAPP |
2.5.1.1.1/10 |
K13789 |
Farnesyl diphosphate synthase/IPP-dimethylallyltransferase |
| Pq44950 |
FPS/DMAPP |
2.5.1.1.1/10 |
K13789 |
Farnesyl diphosphate synthase/IPP-dimethylallyltransferase |
| Pq28280 |
SQS |
2.5.1.21 |
K00801 |
Squalene synthase |
| Pq129610 |
SQE1 |
1.14.13.132 |
K00511 |
Squalene epoxidase 1 |
| Pq7190 |
SQE1 |
1.14.13.132 |
K00511 |
Squalene epoxidase 1 |
| Pq41740 |
DS |
4.2.1.125 |
K15817 |
Dammarenediol-II synthase |
| Pq137240 |
AS |
|
|
β-amyrin synthase |
| Pq133900 |
AS |
|
|
β-amyrin synthase |
| Pq215750 |
AS |
|
|
β-amyrin synthase |
| Pq104900 |
AS |
|
|
β-amyrin synthase |
| Pq194830 |
AS |
|
|
β-amyrin synthase |
| Pq75200 |
P450 |
|
|
Cytochrome P450, CYP73A5 |
| Pq7360 |
P450 |
|
|
Cytochrome P450, CYP71B25 |
| Pq9780 |
P450 |
|
|
Cytochrome P450, CYP75B1 |
| Pq10460 |
P450 |
|
|
Cytochrome P450, CYP71A26 |
| Pq142430 |
P450 |
|
|
Cytochrome P450 |
| Pq108220 |
P450 |
|
|
Cytochrome P450, CYP710A1 |
| Pq137680 |
GT |
|
|
UDP-Glycosyltransferase |
| Pq47050 |
GT |
|
|
Glycosyltransferase, GAUT9 |
| Pq177130 |
GT |
|
|
Glycosyltransferase, GAUT14 |
| Pq117050 |
GT |
|
|
UDP-Glycosyltransferase |
| Pq158770 |
GT |
|
|
α 1,4-Glycosyltransferase |
| Pq10160 |
GT |
|
|
UDP-Glycosyltransferase, 71C4 |
| Pq315* | GT | UDP-Glycosyltransferase |
* This gene possessed 96 splice variants and may be an artefact of assembly.