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. 2012 Nov 19;1:50. [Version 1] doi: 10.12688/f1000research.1-50.v1

Table 5. MiRNA predictions for target genes associated with significant coronary disease using TARGETSCAN.

Individual miRNAs target genes identified as significantly different between patients with and without significant coronary disease were selecting using the context score, a sum of; site-type contribution, 3’ pairing contribution, local AU contribution, and position contribution. The lowest scores show highest predictions.

Target gene Gene name/miRNA Name Total Context Score
hsa-miR-494*
SOCS6 Suppressor of cytokine signaling 6 -1.06
HMGCS1 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) -0.88
COL6A6 Collagen type VI alpha 6 -0.64
BCAP29 B-cell receptor-associated protein 29 -0.53
SCARB2 Scavenger receptor class B, member 2 -0.52
IGF1R Insulin-like growth factor 1 receptor -0.31
F11R F11 receptor -0.41
hsa-miR-490-3p*
LEP Leptin -0.32
IL1RAP Interleukin 1 receptor accessory protein -0.31
CD63 CD63 molecule -0.29
TGFBR1 Transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa) -0.21
ADIPOR2 Adiponectin receptor 2 -0.2
MEF2D Myocyte enhancer factor 2D 0
hsa-miR-769-3p*
FAM130A1 Family with sequence similarity 130, member A1 -0.4
SHPK Sedoheptulokinase -0.39
KCNA5 Potassium voltage-gated channel, shaker-related subfamily, member 5 -0.35
MARCKS Myristoylated alanine-rich protein kinase C substrate -0.25
PBRM1 Polybromo 1 -0.24
ISOC2 Isochorismatase domain containing 2 -0.23
MYCL1 V-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) -0.23
KPNA6 Karyopherin alpha 6 (importin alpha 7) -0.2
KDSR 3-ketodihydrosphingosine reductase -0.17
COLEC12 Collectin sub-family member 12 -0.15
TSPAN1 Tetraspanin 1 -0.15
PIM2 Pim-2 oncogene -0.11
KIAA1128 Family with sequence similarity 190, member B (FAM190B) -0.07