Table 5.
Cross-species identification ofGRE half-sites in 5’-regulatory regions of nonregulated genes
| Gene Name | Species | Position | Sequence |
|---|---|---|---|
| Granzyme K (Gzmk) | Rat | −5939 | AcCATgTGGTTGTTCTCTGaATTTGA |
| (2, 7) | Mouse | −5340 | AgCATaTGGTTGTTCTCTGcATTTGA |
| Pleiotropic regulator 1 (Plrg1) | Rat | −1978 | TGATTTAAAATGTTCTTTTCTAgGtt |
| (6, 1) | Mouse | −1037 | TGATTTAAAATGTTCTTTTCTAtGgc |
| cis-Golgi matrix protein | Rat | −5686 | ctgtgGtTCCTGTTCTTAGGcCTCTG |
| (4, 4) | Mouse | −5831 | gctgtGgTCCTGTTCTTAGGtCTCTG |
| Exocytotic complex (sec6) | Rat | −2485 | TTACCTAcAtTGTTCTTTCATTggCT |
| (7, 8) | Mouse | −834 | TTACCTAtAcTGTTCTTTCATTtaCT |
| Rat | −8035 | ACCATAGGATTGTTCTTTTAGTTggA | |
| Mouse | −6306 | ACCATAGGATTGTTCTTTTAGTTtaA | |
| Uroporphyrinogen decarboxylase (Urod) | NM | ||
| MAP kinase kinase (Map2k1) | NM | ||
| Calcineurin subunit A α (Calna1, Ppp3ca) | NM | ||
| 17β-Hydroxysteroid dehydrogenase 10 (HSD17B10) | NM | ||
| Peroxiredoxin 1 (Prdx1) | NM | ||
| BCL2/1.9 kDa-interacting protein 3-like (Bnip31) | NM | ||
| 5’-AMP-activated protein kinase, γ-1 (Prkga1) | NM |
Numbers in parentheses under Gene Name indicate numbers of GRE half-sites identified in rat and mouse, respectively. Sequence column presents regions containing half-sites with conservation in flanking regions. GRE half-sites are underlined, and nonconserved nucleotides are presented in lowercase letters. NM, no matches.