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. Author manuscript; available in PMC: 2014 Apr 1.
Published in final edited form as: Hum Mutat. 2013 Feb 19;34(4):10.1002/humu.22268. doi: 10.1002/humu.22268

Table 1. Classifier Performance.

Accuracy, AUC, precision and recall for all classifiers tested. Bold values indicated the highest value, and multiple bold values indicate that they were statistically the same. AUC, precision, and recall were all computed as weighted averages based on the size of each locus.

Classifier Accuracy AUC Precision Recall
Bagging 43.86% (3.06) 0.82 (0.02) 0.37 (0.03) 0.44 (0.03)
RF 43.14% (3.16) 0.71 (0.16) 0.37 (0.04) 0.43 (0.03)
MI-SVM 42.95% (2.91) 0.80 (0.16) 0.31 (0.03) 0.43 (0.03)
SVM 40.99% (2.57) 0.79 (0.17) 0.26 (0.02) 0.41 0.03
Majority 19.72% (0.34) 0.50 (0.00) 0.04 (0.00) 0.20 0.00