Table 5. Differential exon expression in selected DEGs in liver samples from boars with divergent skatole levels in backfat.
Chr | GeneID (+/−indicates strand) | Transcripts | Gene Name | Exon ID | Start | End | Log2fold(high/low) | P-adjust |
1 | 407060- | XM_001927795.4 | HSPA5 | E001 | 299754033 | 299754610 | −0.175 | 0.049 |
3 | 100525281+ | XM_003124487.1 | HSD3B7 | E007 | 17843326 | 17844524 | −0.689 | 3.89e-05 |
4 | 100156038+ | XM_003355245.1 | PGM3 | E010 | 119097423 | 119098520 | −0.341 | 0.013 |
5 | 100157156− | XM_001929410.2 | ATP5B | E001 | 23659081 | 23659341 | −0.321 | 0.026 |
5 | 100157156− | XM_001929410.2 | ATP5B | E002 | 23660897 | 23661098 | −0.224 | 0.039 |
5 | 100152077− | NM_001159615.1 | KRT8 | E001 | 18663339 | 18663700 | −0.286 | 0.001 |
5 | 100151790+ | NM_001184895.1 | PMM1 | E008 | 4347163 | 4347697 | −0.354 | 0.013 |
5 | 100151790+ | NM_001184895.1 | PMM1 | E008 | 4347163 | 4347697 | −0.354 | 0.013 |
6 | 397566− | XM_003127946.1 | PGM1 | E010 | 137200412 | 137200574 | −0.417 | 0.013 |
6 | 397566− | XM_003127945.2 | PGM1 | E010 | 137200412 | 137200574 | −0.417 | 0.013 |
6 | 397566− | XM_003127945.2 | PGM1 | E012 | 137233155 | 137233581 | −0.504 | 3.35e-05 |
6 | 100512476+ | XM_003128039.1 | PRDX1 | E003 | 153249744 | 153249811 | −2.125 | 0.001 |
6 | 100621392+ | XM_003356202.1 | GALE | E011 | 75420510 | 75420891 | −0.393 | 0.001 |
12 | 100737417+ | XM_003483067.1 | TNFAIP1 | E007 | 46536059 | 46537702 | 0.222 | 0.040 |