Table 1. Genome statistics of Capsaspora owczarzaki and other eukaryotes.
H. sa | N. vec | A. que | M. bre | C. owc | N. cra | S. cer | D. dis | |
---|---|---|---|---|---|---|---|---|
Genome size (Mb) | 3,101.8 | 357.0 | 167.1 | 41.6 | 28.0 | 41.0 | 12.1 | 34.1 |
% GC | 40.9 | 40.6 | 31.1 | 54.9 | 53.8 | 48.2 | 38.3 | 22.4 |
Number of genes | 22,128 | 27,273 | 30,327 | 9,171 | 8,657 | 9,730 | 5,863 | 12,474 |
Gene density (per Mb) | 7.1 | 76.4 | 181.4 | 220.3 | 309.5 | 237.3 | 485.7 | 365.5 |
CDS % genome | 1.2 | 7.6 | 21.4 | 39.7 | 58.7 | 36.3 | 72.4 | 61.8 |
Mean intron # per gene | 8.8 | 4.3 | 4.7 | 6.6 | 3.8 | 1.7 | 0.1 | 1.5 |
Mean intron size (bp) | 5,645 | 799 | 251 | 171 | 166 | 115 | 203 | 139 |
Mean inter-CDS size (bp) | 99,262 | 6,707 | 3,205 | 1,490 | 724 | 2,440 | 571 | 804 |
A. que, Amphimedon queenslandica; C. owc, Capsaspora owczarzaki; D. dis, Dictyostelium discoideum; H. sa, Homo sapiens; M. bre, Monosiga brevicollis; N. cra, Neurospora crassa; N. vec, Nematostella vectensis; S. cer, Saccharomyces cerevisiae.