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. 2013 Jul 4;29(18):2253–2260. doi: 10.1093/bioinformatics/btt389

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© The Author(s) 2013. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 1. — Example k-mer/taxonomy database. Input includes the taxonomy tree with interior tree nodes , and leaf node genomes , all of which are labeled with taxonomy IDs. k-mers (k-mer1, k-mer2, k-mer3) are linked to their source genomes (dotted circles) and their taxonomy hierarchy up to the LCA

Inline graphic — Example k-mer/taxonomy database. Input includes the taxonomy tree with interior tree nodes , and leaf node genomes , all of which are labeled with taxonomy IDs. k-mers (k-mer1, k-mer2, k-mer3) are linked to their source genomes (dotted circles) and their taxonomy hierarchy up to the LCA