Table 4.

Motif correlation analysis

Motif #	RelA	Long Gapped SP1	PolyA	Alu	BrkPoint	SP1-var	AP1	Gapped SP1
RelA		0.21	1.89	6.60D	0.17	0.52	2.48	0.00
Long Gapped SP1			5.87D	29.90E	50.58E	27.50E	30.42D	32.76E
PolyA				39.83E	0.24	53.27D	62.85D	11.40D
Alu					64.08E	5.95D	1.00	40.29E
BrkPoint						29.91E	9.06D	74.08E
SP1-var							45.82D	16.80E
AP1								16.27E
Gapped SP1

For each motif in Table 2, χ² correlations with other motifs in the top 20% RelA ChIP peaks are shown. D, depleted; E, enriched. Note that AP1 is depleted in the presence of any other motif found.