Table 1.
Variant | Modification | Template plasmid | Forward primer |
---|---|---|---|
pB-C3-SbfI | Create SbfI site | pB-C3 | 5′CCCTATAGTACAGAACCTGCAGGGGCAAATGGTGCATCAG3′ |
pB-C3-SbfI-MscI | Create MscI site | pB-C3-SbfI | 5′GTCAGGGAGTGGGGGGACCTGGCCATAAAGCAAGAG3′ |
pB-NL-C3-R | D248G | pB-NL-C3-SbfI-MscI | 5′GTACCCTTCGGGAACAAATAGGTTGGATGACAAGTAATCCACC3′ |
pB-NL-C3-0 | R244Q | pB-NL-C3-R | 5′CAGGAACTACTAGTACCCTTCAGGAACAAATAGGTTGGATGAC3′ |
pB-NL-C3-NR | T242N | pB-NL-C3-R | 5′CATAGCAGGAACTACTAGTAACCTTCGGGAACAAATAGGTTGG3′ |
pB-NL-C3-N | T242N | pB-NL-C3-0 | 5′CATAGCAGGAACTACTAGTAACCTTCAGGAACAAATAGGTTGG3′ |
The SbfI (CCTGCAGG) and MscI (TGGCCA) restriction sites or the codon modified by mutagenesis are underlined. The nucleotides modified in the target sequences are shown in bold. Only the forward primer is shown in the table; the reverse primer was the reverse complement of the forward primer.