Table 4.
ORF | Position (5′–3′) | Length of protein (aa) | Identity (%) throughout the whole length to: |
Conserved domain(s) | Predicted function | |
---|---|---|---|---|---|---|
P2 | Pyocin R2 | |||||
1 | 712–3048 | 778 | TOPRIM_primases superfamily, virulence-associated protein E superfamily | Unknown | ||
2 | 3049–3324 | 91 | Unknown | |||
3 | 3399–3626 | 75 | CE4-SF superfamily | Unknown | ||
4 | 3668–4306 | 212 | 1 superfamily (deoxynucleotide monophosphate kinase) | Unknown | ||
5 | 4459–4842 | 127 | Unknown | |||
6 | 5177–5626 | 149 | HTH superfamily, Mor superfamily | Transcriptional regulator | ||
7 | 5623–5973 | 116 | Unknown | |||
8 | 5970–6455 | 161 | gpK (48.8) | lysozyme_like superfamily | Endolysin | |
9 | 6452–6829 | 125 | Holin | |||
10 | 7182–7736 | 184 | Unknown | |||
11 | 7733–8323 | 196 | gpV (32.7) | VR2 (29.5) | Phage_base_V superfamily | Tail spike |
12 | 8376–8714 | 112 | gpW (33.6) | WR2 (41.1) | GPW_gp25 superfamily | Baseplate-assembly |
13 | 8717–9613 | 298 | gpJ (45.3) | JR2 (50.5) | Baseplate_J superfamily | Baseplate-assembly |
14 | 9606–10385 | 259 | gpI (22.3) | IR2 (20.5) | Tail formation | |
15 | 10393–12360 | 655 | Tail fiber | |||
16 | 12362–13021 | 219 | Unknown | |||
17 | 13128–14330 | 400 | gpFI (34.1) | FIR2 (43.5) | Phage_sheath_1 superfamily | Major tail sheath |
18 | 14333–14836 | 167 | gpFII (29.1) | FIIR2 (37.5) | Phage_tube superfamily | Major tail tube |
19 | 14917–15207 | 96 | PRF19 (24.4) | FluMu_gp41 superfamily | Unknown | |
20 | 15328–17775 | 815 | Tape_meas_TP901 family | Tail tape measure | ||
21 | 17778–18245 | 155 | gpU (24.3) | UR2 (16.9) | Phage_P2_GpU superfamily | Tail formation |
22 | 18229–18444 | 71 | gpX (39.4) | XR2 (39.4) | Phage_tail_X superfamily | Tail formation |
23 | 18501–19508 | 335 | gpD (24.2) | DR2 (26.9) | Phage_GPD superfamily | Tail formation |