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. 2013 Aug 27;11(8):e1001642. doi: 10.1371/journal.pbio.1001642

Table 1. Distribution of REV-related sequences in vertebrate and virus genomes.

No. of Highly Significant Matches Detectedb
Species/Groupa LTR Leader Gag Pol Env
Mammals
European hedgehog (Erinaceus europaeus) 76 166
Madagascar tenrec (Echinops telfairi) 5
Flying fox (Pteropus vampyrus) 7 14
Little brown bat (Myotis lucifugus) 9 3
Ferret (Mustela putroius furo) 4
Hoffmann's two toed sloth (Choloepus hoffmanni) 7
Gray short-tailed opossum (Monodelphis domestica) 4
Nine-banded armadillo (Dasypus novemcinctus) 1
Phillipine tarsier (Tarsius syrichta) 3
Cape hyrax (Procavia capensis) 1 13
Large DNA viruses
Marek's disease virus (MDV) 4
Fowlpox virus (FWPV) 15 2 2 2 1
a

Only species in which highly significant matches were detected are shown. Table S2 provides a complete list of avian and mammalian species for which whole genome sequence data were screened. For large DNA viruses we screened all “Herpesviridae” and “Poxviridae” sequences in GenBank.

b

Highly significant matches were identified using an empirically determined BLAST bitscore threshold (see Materials and Methods).