Table 6.
Overview of PRIMO-REMD peptide folding simulations.
system | sequence | time (ns) | # replicas | T range (K) | time for analysis (ns) |
---|---|---|---|---|---|
AQA | (AAQAA)3 | 100 | 12 | 270–500 | 30–100 |
AK17 | (AAKAA)3GY | 100 | 12 | 270–500 | 30–100 |
GB1 | GEWTYDDATKTFTVTE | 200 | 12 | 270–500 | 50–200 |
GB1m2 | GEWTYNPATGKFTVTE | 200 | 12 | 270–500 | 50–200 |
trpzip2 | SWTWENGKWTWK | 150 | 12 | 270–500 | 50–150 |
C–peptide | KETAAAKFERQHM | 100 | 12 | 270–500 | 30–100 |