Table 4. Protein datasets of 11 insect species tested for orthology using orthoMCL.
Species | Order | No. Proteins | Data Source (URL) |
---|---|---|---|
A. gambiae | Diptera | 12,457 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summary |
A. aegypti | Diptera | 15,419 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summay |
C. pipiens | Diptera | 18,883 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summary |
D. melanogaster | Diptera | 14,076 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summary |
A. mellifera | Hymenoptera | 9257 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summary |
A. pisum | Hemiptera | 10,466 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summary |
T. castaneum | Coleoptera | 16,645 | http://beetlebase.org/ |
P. humanus | Phthiraptera | 10,773 | http://orthomcl.org/cgi-bin/OrthoMclWeb.cgi?rm=genome&type=summary |
B. mori | Lepidoptera | 22,163 | http://sgp.dna.affrc.go.jp/KAIKObase/ |
D. plexippus | Lepidoptera | 15,130 | http://monarchbase.umassmed.edu |
H. melpomene | Lepidoptera | 12,829 | http://butterflygenome.org/ |