TABLE 1.
Data set (PDB code) | Phasing | pH 8.5 (4KNT) | pH 6.5 (4KNU) | pH 6.5 reduced (4KNS) |
---|---|---|---|---|
Data collection | ||||
Space group | C2 | C2 | P21 | P21 |
Cell dimensions | a = 100, b = 123, and c = 88 Å; γ = 97° | a = 100, b = 123, and c = 88 Å; γ = 97° | a = 51, a = 137, and c = 121 Å; γ = 101° | a = 51, b = 138, and c = 120 Å; γ = 101° |
Resolution (Å)a | 2.4 (2.49–2.40) | 1.9 (1.90–1.95) | 1.8 (1.80–1.85) | 2.2 (2.20–2.26) |
Rsyma,b | 0.191 (0.387) | 0.096 (0.443) | 0.120 (0.463) | 0.112 (0.530) |
I/σIa | 11.7 (3.4) | 15.2 (2.8) | 11.5 (2.3) | 11.6 (2.1) |
Completeness (%)a | 100 (100) | 98.6 (94.5) | 99.6 (98.1) | 91.0 (91.7) |
Refinement | ||||
Rworkc/Rfreed | 16.9/20.0 | 17.1/20.9 | 18.5/22.9 | |
Ramachandran outliers (%) | 0 | 0 | 0 | |
Average B-factor | 19.6 | 14.4 | 27.1 | |
r.m.s.d.e | ||||
Bond lengths (Å) | 0.006 | 0.008 | 0.005 | |
Bond angles | 0.609° | 1.244° | 0.923° |
a Values in parentheses refer to the highest resolution shell.
b Rsym = Σ|Iobs − Iav|/ΣFobs, where the summation is over all reflections.
c Rwork = Σ|Fobs − Fcalc|/ΣFobs.
d For calculation of Rfree, 5% of the reflections were reserved.
e r.m.s.d., root mean square deviation.