Skip to main content
. 2013 Sep 2;8(9):e72821. doi: 10.1371/journal.pone.0072821

Table 2. Percent secondary structure content of SP-B (1–25,63–78) (Super Mini-B), SP-B (8–25,63–78) (Mini-B) and SP-B (1–7) (the insertion sequence) in SDS micelles calculated from CD spectra (average of 4 scans).

Secondary Structure (%) α-helix 310-helix β-Sheet Turn Polyproline II Unordered
SP-B (1–25,63–78) (Super Mini-B) ContinLL Method 24 7 13 14 6 36
SP-B (1–25,63–78) (Super Mini-B) K2D Method 29 16 55
SP-B (8–25,63–78) (Mini-B) ContinLL Method 37 9 13 5 30
SP-B (8–25,63–78) (Mini-B) K2D Method 42 16 41

Deconvolution of CD spectra was accomplished using CDPro, with basis set 2 and the CONTIN/LL algorithm [49] and also with the K2D method [52].