Table 1.
Refinement and geometry statistics for all 16 dNTP/dN-containing qm RB69pol ternary complexes.
| Base Pairs | dNTP/dN | PDB code | Resolution (Å) | R(%) | Rfree(%) | d(C1’–C1’) (Å) | λ(dNTP)(°) | λ(dN)(°) |
|---|---|---|---|---|---|---|---|---|
|
| ||||||||
| Correct BP | dATP/dT | 4FJ5 | 2.05 | 18.4 | 23.7 | 10.3 | 59.0 | 57.6 |
| dTTP/dA | 4FJN | 2.00 | 19.9 | 24.1 | 10.4 | 60.3 | 55.2 | |
| dGTP/dC | 4FJH | 2.11 | 17.5 | 22.2 | 10.4 | 56.2 | 55.4 | |
| dCTP/dG | 4FK0 | 2.18 | 20.3 | 25.6 | 10.5 | 57.7 | 54.4 | |
|
| ||||||||
| Py-Py | dCTP/dC | 4FJI | 2.20 | 21.0 | 26.4 | 10.3 | 65.2 | 65.5 |
| dCTP/dT | 4FJ8 | 2.19 | 19.5 | 25.1 | 10.7 | 64.4 | 60.3 | |
| dTTP/dC | 4FJJ | 2.00 | 18.6 | 22.5 | 10.8 | 62.4 | 63.3 | |
| dTTP/dT | 4FJ9 | 1.97 | 19.0 | 23.4 | 9.5 | 69.6 | 40.7 | |
|
| ||||||||
| Pu-Py | dATP/dC | 4FJG | 2.02 | 22.0 | 25.9 | 10.5 | 64.5 | 54.4 |
| dCTP/dA | 4FJM | 2.02 | 19.1 | 23.4 | 10.3 | 68.9 | 48.4 | |
| dGTP/dT | 4FJ7 | 1.90 | 18.1 | 21.3 | 10.5 | 49.5 | 62.4 | |
| dTTP/dG | 4FK2 | 2.00 | 18.6 | 22.5 | 10.3 | 69.1 | 45.0 | |
|
| ||||||||
| Pu-Pu | dATP/dA | 4FJK | 2.00 | 18.2 | 22.5 | 16.3 | 69.7 | 153.2 |
| dATP/dG | 4FJX | 2.12 | 18.3 | 22.5 | 10.9 | 54.2 | 112.3 | |
| dGTP/dA | 4FJL | 1.87 | 17.9 | 22.2 | 16.3 | 67.2 | 153.1 | |
| dGTP/dG | 4FK4 | 1.90 | 18.7 | 22.2 | 10.9 | 54.0 | 113.2 | |
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