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. Author manuscript; available in PMC: 2013 Sep 4.
Published in final edited form as: J Proteome Res. 2012 Oct 12;11(11):5301–5310. doi: 10.1021/pr300797v

Table 1.

Proteins Binding Canscript Sequence as Identified by SD-MS

accession gene IDa # of peptides identified times identifiedb ratio (heavy/light, WT/MT)c
NP_003205.2 TEAD3d 10 3/3 ≥100
NP_068780.2 TEAD1d,e 12 3/3 ≥93
NP_008896.2 ZNF24e 7 3/3 ≥41
NP_003204.2 TEAD4d 9 2/3 ≥100
NP_004354.2 CEACAM5e 2 2/3 ≥100
NP_002909.4 RFX1e 2 2/3 ≥54
NP_001129493.1 NFATC2d,e 3 2/3 ≥49
NP_005957.2 NAB1d,e 2 1/3 ≥40
NP_001091947.1 GRSF1e 2 2/3 ≥15
a

Full names of identified proteins are provided in Supporting Information Table S1.

b

SD-MS was replicated three times using independent extracts.

c

Candidates having a WT/MT ratio of at least 10 are listed. WT, Canscript wild-type; MT, Canscript C5M6C mutant.

d

Also identified this protein or a member of this protein family by TFM.

e

Included among the proteins examined by immunoblot after DNA affnity-capture.