Table 5. Filtered (full-length) vs. Unfiltered (partial and full-length) repetitive content estimates.
P + F (Homology) | Filtered (Homology) | P + F (de novo) | Filtered (de novo) | |
Class I | 20.41% | 1.39% | 73.39% | 21.82% |
Class II | 4.03% | 0% | 1.52% | 0.53% |
Other | 3.06% | 2.6% | 10.91% | 4.16% |
Total | 27.50% | 3.99% | 85.82% | 26.51% |