Table 2.
List of methanol-utilizing methylotophs that are not included in a previous survey (Kolb, 2009a).
| Class/phylum | Isolation source | fac | pH | Reference |
|---|---|---|---|---|
| Actinobacteria | ||||
| Micrococcus luteus MM7 | Oral Cavity | + | nn | Anesti et al. (2005) |
| Bacilli | ||||
| Bacillus vallismortis JY3A | Soil | + | N | Ling et al. (2011) |
| Alphaproteobacteria | ||||
| Ancylobacter dichloromethanicus DM16T | Soil | + | N | Firsova et al. (2009) |
| Ancylobacter oerskovii NS05 | Soil | + | N | Lang et al. (2008) |
| Ancylobacter polymorphus DSM 2457 | Soil | + | N | Xin et al. (2006) |
| Ancylobacter rudongensis JCM 1167 | Rhizosphere | + | N | Xin et al. (2004) |
| Ancylobacter vacuolatus DSM 1277 | Soil | + | N | Xin et al. (2006) |
| Methylobacterium bullatum B3.2 | Phyllosphere | + | N | Hoppe et al. (2011) |
| Methylobacterium cerastii C15 | Phyllosphere | + | Act | Wellner et al. (2012) |
| Methylobacterium gnaphalii AB627071 | Phyllosphere | + | nn | Tani et al. (2012a) |
| Methylobacterium goesingense AY364020 | Rhizosphere | + | N | Idris et al. (2006) |
| Methylobacterium gossipiicola Gh-105 | Phyllosphere | + | N | Madhaiyan et al. (2012) |
| Methylobacterium longum DSM 23933 | Phyllosphere | + | N | Knief etal. (2012a, b) |
| Methylobacterium marchantiae DSM 21328 | Phyllosphere | + | N | Schauer et al. (2011) |
| Methylobacterium oxalidis DSM 24028 | Phyllosphere | + | N | Tani et al. (2012b) |
| Methylobacterium phyllosphaera BMB27 | Phyllosphere | + | N | Madhaiyan et al. (2009a) |
| Methylocapsa aurea DSM 22158 | Soil | + | Act | Dunfield et al. (2010) |
| Methyloferula stellata AR4 | Soil | - | Ac | Vorobev et al. (2011) |
| Methlyopila jiangsuensis DSM 22718 | Activated sludge | + | N | Li et al. (2011) |
| Starkeya koreensis Jip08 | Phyllosphere | + | N | Im et al. (2006) |
| Starkeya novella IAM 12100 | Phyllosphere | + | N | Im et al. (2006) |
| Betaproteobacteria | ||||
| Methylobacillus arboreus VKM B-2590 | Phyllosphere | + | N | Gogleva et al. (2011) |
| Methylobacillus gramineus VKM B-2591 | Phyllosphere | + | N | Gogleva et al. (2011) |
| Methylopila musalis MUSAT | Banana | + | N | Doronina et al. (2013) |
| Methylophilus rhizosphaerae BMB147 | Rhizosphere | + | N | Madhaiyan et al. (2009b) |
| Methylophilus glucosoxydans B | Rhizosphere | + | N | Doronina et al. (2012) |
| Methylophilus flavus DSM 23073 | Phyllosphere | - | N | Gogleva et al. (2010) |
| Methylophilus luteus DSM 2949 | Phyllosphere | + | N | Gogleva et al. (2010) |
| Methylotenera versatilis JCM 17579 | Sediment | + | N | Kalyuzhnaya et al. (2012) |
| Methylovorus menthalis DSM 24715 | Rhizosphere | - | Al | Doronina et al. (2011) |
| Variovorax paradoxus 5KTg | Oral Cavity | + | nn | Anesti et al. (2005) |
| Gammaproteobacteria | ||||
| Methylomonas koyamae MG30 | Water of rice paddy | - | Act | Ogiso et al. (2012) |
| Methylomonas scandinavica SR5 | Groundwater | - | N | Kalyuzhnaya et al. (1999) |
| Methylomonas paludis MG30 | Torfmoor | - | Act | Danilova et al. (2013) |
| Methylothermus subterraneus DSM 19750 | Aquifer | - | Act | Hirayama et al. (2011) |
| Methylophaga lonarensis MPL | Sediment | - | Al | Antony et al. (2012b) |
| Methylophaga sulfidovorans RB-1 | Sediment | - | N | de Zwart et al. (1996) |
| Methylophaga thiooxydans DSMO10 | Marine waters | + | nn | Boden et al. (2010) |
fac, facultative methylotrophic; +, growth in substrates with carbon –carbon bonds; -, no growth in substrates with carbon –carbon bonds; nn, no information in species description; enrichment at pH 7; N, neutrophile (growth optimum between pH 6.5 and 8.0); Act, acid tolerant (growth optimum between pH 3.0 und 6.5); Ac, acidiphilic (growth optimum below pH 3); Al, alcaliphilic (growth optimum over pH 8).