Table 2.
Annotation of differentially expressed genes during different stages of somatic versus zygotic embryogenesis in Musa acuminata ssp. malaccensis and their location in the chromosomes of banana genome.
| TDF number (base pairs) |
Hit to the Musa chromosome no. | E value | % identity | Protein | Embryogenesis stage |
|---|---|---|---|---|---|
| 7-1-2 (88 ) | 6 | 9E − 21 | 95.24 | CTP synthase 2 | MZE |
| 7-1-4 (71) | 5 | 4E − 13 | 97.62 | Serine/threonine-protein kinase | ECS |
| 17-1-5 (299) | All | 2E − 55 | 99.12 | — | MSE, MZE |
| 24-2-1 (286) | 6 | 5E − 56 | 99.0 | 1,4-α-glucan-branching enzyme 2 chloroplastic/amyloplastic ~SBE1 | All stages of somatic embryogenesis |
| 35-2-3 (225) | 1 | 1E − 107 | 99.5 | — | IZE |
| 43-1-1 (163) | 10 | 8E − 66 | 99.24 | — | IZE |
| 46-5-4 (119) | All | 2E − 22 | 89.36 | Putative signal peptide peptidase-like 3 | All stages of somatic embryogenesis |
| 47-1-2 (148) | 7 | 3E − 59 | 100 | — | MSE |
| 47-1-4 (149) | All (6) | 3E − 25 | 87.83 | — | MSE |
| 47-1-5 (192) | 4 | 8E − 11 | 92.16 | Early-responsive to dehydration protein-related | MSE |
| 58-1-2 (94) | 4 | 6E − 16 | 96.08 | Early-responsive to dehydration protein-related, | ECS |
| 58-1-3 (88) | 6 | 9E − 21 | 95.24 | CTP synthase 2 | ECS |
| 60-1-3 (71) | 5 | 4E − 13 | 97.62 | Serine/threonine-protein kinase | ECS |
| 60-5-4 (120) | 6 | 3E − 18 | 90.67 | Putative BSD domain containing protein | ECS |
| 60-5-7 (116) | 7 | 2E − 44 | 100 | Probably the indole-3-acetic-acid-amido synthetase GH3.1 | ECS |
MZE and MSE: matured zygotic and somatic embryo, IZE: immature zygotic embryo; ECS: embryogenic cell suspension.