Skip to main content
. 2013 Aug 15;4(8):e769. doi: 10.1038/cddis.2013.296

Table 1. RNAi screen parameters from different published influenza RNAi screens.

  Tran et al. (this study) Shapiraet al.11 Koniget al.14 Karlaset al.13 Brasset al.17 Suiet al.15 Haoet al.16
Approach RNAi screen Yeast-2-hybrid• RNAi screen RNAi screen RNAi screen RNAi screen Random homozygous gene perturbation RNAi screen
Screen parameter Selection of surviving cells after influenza infection Level of Renilla luciferase expression in 293T reporter cells Level of Renilla luciferase expression Level of Renilla luciferase expression in 293T reporter cells Stained for surface expression of HA Host gene perturbation Level of reporter gene expression
End point (h.p.i.) 72 h.p.i. 48 h.p.i. 36 h.p.i. 24 h.p.i. 12 h.p.i. 48 h.p.i. 24–48 h.p.i.
No. of genes screened 21,415 1745 19 628 22 843 17 877 NA 13 071
Delivery method Lentiviral Transfection Transfection Transfection Transfection Lentiviral Infection with recombinant virus
Total candidates 1256 Genes 616 genes 295 Genes 287 Genes 312 Genes 110 Clones 110
Genes in biological replicates 138 NA NA NA NA NA NA
Virus used NY55 (H3N2), PR8 (H3N2), pandemic California (H1N1) PR8 (H1N1), Udorn (H3N2) Recombinant WSN (H1N1), HA-luciferase WSN (H1N1) PR8 (H1N1) Udorn (H3N2) Recombinant WSN (H1N1) with VSV G protein and NA-luciferase
Cell line used in screen A549 cells 293T and HBEC cells A549 cells A549 and 293T cells U2OS cells MDCK cells Drosophila cells

NA, not available