Table 5.
Genes Preferentially Expressed in Fast Myoblasts
| Gene Symbol | Probe Set ID | Fold Change | Gene Title/Comments |
|---|---|---|---|
| Cell Adhesion | |||
| ALCAM | Gga.2734.1.S2_at | 7.70 | activated leukocyte cell adhesion molecule |
| ANKK1 | GgaAffx.22381.3.S1_s_at | 2.65 | ankyrin repeat and kinase domain containing 1 |
| ITGB3 | Gga.1039.1.S1_at | 2.31 | integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) |
| Cell Cycle | |||
| CCNF | GgaAffx.22831.1.S1_at | 2.18 | cyclin F |
| CDKN2C | GgaAffx. 6661.1.S1_at | 2.49 | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) |
| CKS2 | Gga.1958.1.S1_a_at | 3.34 | CDC28 protein kinase regulatory subunit 2 |
| GINS1 | Gga.12208.1.S1_a_at | 3.12 | GINS complex subunit 1 (Psf1 homolog) |
| KNTC1 | GgaAffx.26234.1.S1_s_at | 2.01 | kinetochore associated 1 |
| SEPT2 | GgaAffx.3632.1.S1_at | 2.32 | septin 2 |
| Chromatin Remodeling | |||
| SUZ12 | Gga.19626.1.S1_s_at | 2.11 | suppressor of zeste 12 homolog (Drosophila) |
| Cytoskeleton | |||
| AFAP1 | Gga.185.1.S1_a_at | 2.33 | actin filament associated protein 1 |
| DCTN4 | GgaAffx.2799.1.S1_at | 3.04 | dynactin 4 (p62) |
| DYNLL2 | Gga.17308.1.S1_s_at | 2.07 | dynein, light chain, LC8-type 2 |
| KIF26A | GgaAffx.23603.1.S1_s_at | 2.05 | kinesin family member 26A |
| MAP4 | GgaAffx.21343.1.S1_s_at | 2.04 | microtubule-associated protein 4 |
| Metabolism | |||
| AER61 | GgaAffx.8545.1.S1_s_at | 2.00 | glycosyltransferase |
| ASPH | Gga.11883.4.S1_s_at | 2.35 | Aspartate beta-hydroxylase |
| B4GALT6 | GgaAffx.9633.1.S1_s_at | 3.60 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 |
| COMT | Gga.7199.1.S1_s_at | 3.35 | catechol-O-methyltransferase |
| DHFR | GgaAffx.11934.1.S1_s_at | 2.07 | dihydrofolate reductase |
| GLT25D2 | Gga.3249.1.S1_at | 2.49 | glycosyltransferase 25 domain containing 2 |
| HEXB | Gga.9970.1.S1_at | 2.40 | hexosaminidase B (beta polypeptide) |
| HMGCR | GgaAffx.12414.1.S1_s_at | 2.20 | 3-hydroxy-3-methylglutaryl-Coenzyme A reductase |
| MAN1A1 | Gga.20070.1.S1_at | 3.38 | mannosidase, alpha, class 1A, member 1 |
| NADK | GgaAffx.907.1.S1_at | 2.20 | NAD kinase |
| NAT13 | GgaAffx.9403.1.S1_s_at | 2.17 | N-acetyltransferase 13 |
| PCMT1 | Gga. 16623.2.S1_a_at | 2.08 | protein-L-isoaspartate (D-aspartate) O-methyltransferase |
| PMPCB | Gga.7638.1.A1_at | 2.28 | peptidase (mitochondrial processing) beta |
| PTPN2 | Gga.1107.1 .S1_at | 2.15 | protein tyrosine phosphatase, non-receptor type 2 |
| ROR1 | Gga.9476.1.S1_at | 2.56 | receptor tyrosine kinase-like orphan receptor 1 |
| SENP8 | GgaAffx.1329.1.S1_at | 2.43 | SUMO/sentrin specific peptidase family member 8 |
| ST3GAL1 | Gga. 3672.1.S1_at | 3.26 | ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
| ST8SIA2 | Gga.19493.2.S1_s_at | 4.92 | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 |
| TXNDC10 | GgaAffx.24266.1 .S1_at | 2.21 | thioredoxin domain containing 10 |
| Signal Transduction | |||
| ADCYAP1R1 | GgaAffx. 3269.1. S1_at | 12.84 | adenylate cyclase activating polypeptide 1 (pituitary) receptor type I |
| ARHGAP12 | GgaAffx.4536.1.S1_s_at | 2.39 | Rho GTPase activating protein 12 |
| BMPR1A | Gga.755.1.S1_at | 2.27 | bone morphogenetic protein receptor, type IA |
| DKK3 | Gga.3573.2.S1_a_at | 4.44 | dickkopf homolog 3 (Xenopus laevis) |
| EDN1 | GgaAffx.8070.1.S1_at | 5.40 | endothelin 1 |
| EPHB3 | Gga.3053.1.S1_at | 2.03 | EPH receptor B3 |
| FGF13 | GgaAffx.21832.1.S1_s_at | 7.36 | fibroblast growth factor 13 |
| FGFR3 | Gga.16413.1.A1_a_at | 5.02 | fibroblast growth factor receptor 3 |
| FLT1 | Gga.150.2.S1_a_at | 2.72 | fms-related tyrosine kinase 1 |
| FRZB | Gga.4955.1.S1_at | 3.08 | frizzled-related protein |
| GDF10 | GgaAffx.3720.1.S1_at | 8.39 | growth differentiation factor 10 |
| GFRA1 | Gga.588.1.S1_at | 3.21 | GDNF family receptor alpha 1 |
| GPR23 | Gga.11466.2.S1_a_at | 6.08 | G protein-coupled receptor 23 |
| IL1R1 | Gga.846.1.S1_at | 2.32 | interleukin 1 receptor, type I |
| ITPR3 | GgaAffx.1993.5.S1_s_at | 2.37 | inositol 1,4,5-triphosphate receptor, type 3 |
| KREMEN1 | GgaAffx.3631.1.S1_at | 2.67 | kringle containing transmembrane protein 1 |
| MRAS | Gga.5500.2.S1_a_at | 2.22 | muscle RAS oncogene homolog |
| RASL11B | Gga.12911.1.S1_at | 2.16 | RAS-like, family 11, member B |
| RGS3 | Gga.8344.2.A1_a_at | 3.47 | regulator of G-protein signalling 3 |
| RPS6KA1 | Gga.9321.1.S1_at | 7.40 | ribosomal protein S6 kinase, 90kDa, polypeptide 1 |
| SOCS1 | Gga.10606.1.S1_at | 2.74 | suppressor of cytokine signaling 1 |
| Structural | |||
| CTXN1 | GgaAffx.210.1.S1_at | 2.84 | cortexin 1 |
| FBLN2 | GgaAffx.3200.1.S1_s_at | 2.18 | fibulin 2 |
| TNNT2 | Gga.4984.1.S1_at | 3.51 | troponin T type 2 (cardiac) |
| Transcription | |||
| BRD8 | GgaAffx.9060.2.S1_s_at | 2.02 | bromodomain containing 8 |
| BTF3 | Gga.11922.1.S1_at | 2.40 | basic transcription factor 3 |
| E2F1 | Gga.3213.1.S1_at | 2.06 | E2F transcription factor 1 |
| EGR1 | GgaAffx.11738.1.S1_s_at | 2.71 | early growth response 1 |
| FOXP1 | GgaAffx.4846.4.S1_s_at | 2.87 | forkhead box P1 |
| HOXA11 | Gga.957.1.S1_at | 2.06 | homeobox A11 |
| PITX2 | Gga.3398.2.S1_a_at | 4.47 | paired-like homeodomain 2 |
| SNAI1 | Gga.3851.1.S1_at | 2.01 | snail homolog 1 (Drosophila) |
| TCF12 | Gga.4007.3.S1_a_at | 2.03 | transcription factor 12 (HTF4, helix-loop-helix transcription factors 4) |
| ZBTB41 | GgaAffx.25447.1.S1_at | 2.31 | zinc finger and BTB domain containing 41 |
| Transport | |||
| ATP2B1 | GgaAffx.23508.1.S1_at | 2.17 | ATPase, Ca++ transporting, plasma membrane 1 |
| KCNK1 | Gga.4356.1.S1_at | 2.25 | potassium channel, subfamily K, member 1 |
| SLC39A10 | GgaAffx.22358.1.S1_s_at | 2.51 | solute carrier family 39 (zinc transporter), member 10 |
| SNX30 | Gga.11940.1.S1_at | 2.27 | sorting nexin family member 30 |
| VLDLR | Gga.679.1.S1_at | 3.64 | very low density lipoprotein receptor |