Table 3. Cross-validated GS accuracy for DArT and GBS and boostrap p-values for the DArT markers.
Trait | All DArTmarkers | non-redundantDArT markers | All GBS | non-redundant GBS | P-value Redundant | P-value non-redundant |
YLD | 0.36 | 0.36 | 0.41 | 0.39 | 0.29 | 0.48 |
HT | 0.48 | 0.47 | 0.52 | 0.53 | 0.19 | 0.37 |
HD | 0.30 | 0.31 | 0.47 | 0.43 | 0.22 | 0.56 |
PHS | 0.47 | 0.47 | 0.57 | 0.56 | 0.00 | 0.06 |
The cross-validated accuracy is calculated using all DArT markers or all GBS or or with only the non-redundant markers, (YLD: yield, HT: height, HD: heading date, PHS: pre-harvest sprouting). P-values are presented both when all the markers were used for bootstrap and when using only the non-redundant ones for the analysis. To note that the bootstrap P-values do not compare the values obtained with all DArT markers to the value obtained with all GBS.