Table 3. Summary of all detected mutations in PmCDA1-treated clones.
| Description of group | Strain | Mutation typea | C→T | G→A | CC→TT | GG→AA | All types | Mutations per 100 Kbb |
| Haploid CanR mutants induced in LAN200 | LAN200-L1 | “heterozygous” | - | - | - | - | - | 1.25 |
| “homozygous” | 66 | 73 | 0 | 1 | 140 | |||
| LAN200-L2 | “heterozygous” | - | - | - | - | - | 0.78 | |
| “homozygous” | 57 | 30 | 0 | 0 | 87 | |||
| LAN200-L3 | “heterozygous” | - | - | - | - | - | 0.05 | |
| “homozygous” | 4 | 2 | 0 | 0 | 6 | |||
| LAN200-L4 | “heterozygous” | - | - | - | - | - | 0.89 | |
| “homozygous” | 33 | 67 | 0 | 0 | 100 | |||
| Diploid CanR mutants induced in LAN210 | LAN210-L1 | heterozygous | 796 | 604 | 7 | 2 | 1409 | 6.47 |
| homozygous | 10 | 10 | 0 | 0 | 20c | |||
| LAN210-L2 | heterozygous | 196 | 241 | 2 | 3 | 442 | 2.00 | |
| homozygous | 1 | 2 | 0 | 0 | 3c | |||
| LAN210-L3 | heterozygous | 606 | 467 | 4 | 2 | 1079 | 4.87 | |
| homozygous | 4 | 1 | 0 | 0 | 5c | |||
| LAN210-L4 | heterozygous | 1241 | 876 | 10 | 6 | 2133 | 9.71 | |
| homozygous | 13 | 8 | 0 | 0 | 21c | |||
| LAN210-L5 | heterozygous | 332 | 296 | 2 | 0 | 630 | 2.86 | |
| homozygous | 2 | 2 | 0 | 0 | 4c | |||
| LAN210-L6 | heterozygous | 252 | 318 | 2 | 3 | 575 | 2.62 | |
| homozygous | 4 | 2 | 0 | 0 | 6c | |||
| LAN210-L7 | heterozygous | 251 | 254 | 2 | 0 | 507 | 2.34 | |
| homozygous | 3 | 6 | 0 | 0 | 9c | |||
| Diploid FOAR mutants induced in LAN210 | LAN210-FOA-L1 | heterozygous | 492 | 449 | 3d | 1 | 945 | 4.25 |
| homozygous | 1 | 3 | 0 | 0 | 4c | |||
| LAN210-FOA-L2 | heterozygous | 543 | 546 | 3 | 4 | 1096 | 4.26 | |
| homozygous | 4 | 3 | 0 | 0 | 7c | |||
| Diploid non-mutant clones obtained from LAN210 | LAN210-NM1 | heterozygous | 7 | 3 | 0 | 0 | 10 | 0.04 |
| homozygous | 0 | 0 | 0 | 0 | 0 | |||
| LAN210-NM2 | heterozygous | 8 | 6 | 0 | 0 | 14 | 0.06 | |
| homozygous | 0 | 0 | 0 | 0 | 0 | |||
| LAN210-NM3 | heterozygous | 2 | 2 | 0 | 0 | 4 | 0.02 | |
| homozygous | 0 | 0 | 0 | 0 | 0 | |||
| LAN210-NM4 | heterozygous | 19 | 15 | 0 | 0 | 34 | 0.15 | |
| homozygous | 0 | 0 | 0 | 0 | 0 |
a
See Materials and Methods for details of mutation detection. For haploid clones, terms “homozygous” and “heterozygous” are arbitrary and included for simplicity.
b
Values for number of mutations are divided by 112.00363 for haploid strains and 224.00726 for diploid strains. Results are rounded to two decimal points. Homozygous mutations in diploids are treated as two heterozygous mutations.
c
The homozygous mutations were not grouped together (as opposed to the case of HAP) and predominantly localized to the genomic regions enriched for SNVs (see Discussion).
d
- one of the SNVs in this clone was triple CCC→TTT substitution.