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. Author manuscript; available in PMC: 2013 Sep 6.
Published in final edited form as: J Urol. 2012 Jun 15;188(2):514–520. doi: 10.1016/j.juro.2012.04.001

Table 3.

Unadjusted and multivariate adjusted logistic regression of SNPs with erectile dysfunction for P<10−6

 A. Unadjusted Results
Chromosome SNP Position A1 A2 MAF** Missing count Hardy-Weinberg equilibrium P Location of SNP to the nearest gene Nearest Gene p-value*
3 rs9810233 106493580 G A 0.270 1 0.725 flanking_5UTR ALCAM 6.98E-07
3 rs1920201 106518787 G T 0.245 5 0.653 flanking_5UTR ALCAM 8.60E-07
2 rs836589 173201324 A G 0.186 8 0.521 flanking_3UTR PDK1 1.63E-06
3 rs1438552 106545285 G A 0.247 2 0.603 flanking_5UTR ALCAM 1.72E-06
6 rs6931865 144121547 A G 0.336 1 0.901 intron PHACTR2 3.57E-06
3 rs950146 36655103 C A 0.491 5 0.698 flanking_3UTR STAC 4.32E-06
3 rs9850224 142057977 A G 0.010 1 1 flanking_5UTR SLC25A36 4.80E-06
1 rs2990510 195287281 G T 0.305 0 0.556 intron F13B 5.89E-06
1 rs10754210 195278734 A G 0.304 1 0.513 intron F13B 5.89E-06
2 rs7566884 173189446 G A 0.177 1 0.393 flanking_3UTR PDK1 6.39E-06
1 rs4520444 195408611 T G 0.296 5 0.842 intron ZBTB41 7.77E-06
1 rs5998 195276421 G A 0.454 0 0.696 coding F13B 8.30E-06
1 rs7518773 195278259 G A 0.453 2 0.615 intron F13B 8.30E-06
1 rs1332668 195272359 T C 0.455 1 0.655 flanking_3UTR F13B 8.50E-06
 B. Multivariate Results*
Chrom SNP Position A1 A2 MAF# missing Hardy- Weinberg equilibrium P Location of SNP to nearest gene Nearest Gene Model OR 95% CI p-value
3 rs9810233 106493580 G A 0.270 1 0.725 flanking_5UTR ALCAM M1 2.32 1.67 3.22 5.93E-07
3 rs1920201 106518787 G T 0.245 5 0.653 flanking_5UTR ALCAM M1 2.26 1.63 3.14 9.39E-07
6 rs6931865 144121547 A G 0.336 1 0.901 intron PHACTR2 M1 2.02 1.50 2.74 4.85E-06
3 rs950146 36655103 C A 0.491 5 0.698 flanking_3UTR STAC M1 0.48 0.35 0.66 4.77E-06
2 rs836589 173201324 A G 0.186 8 0.521 flanking_3UTR PDK1 M1 2.27 1.58 3.25 8.29E-06
3 rs950146 36655103 C A 0.491 5 0.698 flanking_3UTR STAC M2 0.46 0.33 0.64 6.52E-06
6 rs6931865 144121547 A G 0.336 1 0.901 intron PHACTR2 M2 2.48 1.73 3.54 6.89E-07
*

Fishers exact test.

**

Minor Allele Frequency A1 is the minor allele.

*

All models run with additive tests for significance in PLINK with covariates.

**

Adjusting for cohort, treatment, cohort*treatment. (M1)

***

Adjusting for cohort, treatment, cohort*treatment, diabetes duration, age, initial HgbA1c at eligibility. (M2)

#

Minor Allele Frequency