Skip to main content
. 2013 Jul 8;288(36):26201–26208. doi: 10.1074/jbc.M113.465963

TABLE 1.

Statistics for data collection and refinement

Crystal parameters
    Complex 2 2-HAA 1-HAA UDP-HAA
    Beamline MAXII I911-5 MAXII I911-2 MAXII I911-2 ESRF ID-23-1
    Symmetry C2221 P21212
    Unit cell dimensions (Å)
        a 152.43 78.17 78.30 78.10
        b 48.58 153.25 153.52 153.67
        c 78.80 52.72 52.83 52.50

Data collection
    Resolution range (Å) 20.0–1.75 (1.72–1.68) 30–1.68 (1.95–1.90) 30.0–1.9 20.0–1.80 (1.90–1.80)
    Rsymb (%) 9.4 (65.0) 6.7 (68.8) 12.1 (65.2) 11.4 (65.6)
    Completeness (%) 99.9 (99.9) 95.8 (90.3) 97.5 (95.5) 99.1 (99.4)
    Average I/σ (I) 15.1 (3.3) 17.5 (2.2) 12.6 (2.7) 11.8 (2.5)
    Redundancy 7.3 (7.4) 5.9 (4.8) 6.0 (5.2) 5.2 (5.3)

Refinement statistics
    Resolution range (Å) 19.7–1.75 29.05–1.68 29.11/1.90 19.94/1.80
    Reflections
        Work set/Test set 30,505/945 67,183/2,799 47,821/1,987 57,223/1,771
    No. of atoms
        Protein 2,308 4,741 4,836 4,930
        Ligand 43 124 126 112
        Waters 206 551 568 636
        Glycerol 18
        SO4 5 5 5 10
        Overall B-factor (Å2) 21.9 21.9 18.1 17.1
    R.m.s. deviationc
        Bond lengths (Å) 0.021 0.010 0.007 0.008
        Bond angles (°) 1.884 1.300 1.049 1.208
        R-factord (%) 14.7 16.4 15.9 15.1
        Rfree-factore (%) 17.8 19.2 19.3 19.1
    Ramachandran plot (%)
        Most favored 92.6 92.2 91.5 92.9
        Additionally allowed 7.4 7.8 8.5 7.1

Protein Data Bank ID 3V0L 3V0M 3V0P 3V0Q

a Values in parentheses are for the highest resolution shell.

b Rsym = Σ|(I − <I>)|IΣ(I), where I is the observed intensity.

c R.m.s., root mean square.

d r = Σ‖Fobs| − | Fcalc‖Σ|Fobs|, where |Fobs| and |Fcalc| are observed and calculated structure factor amplitude.

e The Rfree value was calculated with a random 5% subset of all reflections excluded from refinement.