Table 1. Classification and general features of H. phototrophica DFL-43T according to the MIGS recommendations [16].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [17] | |
Phylum Proteobacteria | TAS [18] | ||
Class Alphaproteobacteria | TAS [19,20] | ||
Order Rhizobiales | TAS [20,21] | ||
Family Phyllobacteriaceae | TAS [20,22] | ||
Genus Hoeflea | TAS [2] | ||
Species Hoeflea phototrophica | TAS [1] | ||
MIGS-7 | Subspecific genetic lineage (strain) | DFL-43T | TAS [1] |
MIGS-12 | Reference for biomaterial | Biebl et al. 2006 | TAS [1] |
Gram stain | Gram-negative | TAS [1] | |
Cell shape | rod-shaped | TAS [1] | |
Motility | motile | TAS [1] | |
Sporulation | not reported | ||
Temperature range | mesophile, 25-33°C | TAS [1] | |
Optimum temperature | 31°C | TAS [1] | |
Salinity | 0.5–7.0 % NaCl | TAS [1] | |
MIGS-22 | Relationship to oxygen | aerobe | TAS [1] |
Carbon source | acetate, malate | TAS [1] | |
Energy metabolism | photoheterotroph | TAS [1] | |
MIGS-6 | Habitat | marine | TAS [1] |
MIGS-6.2 | pH | 6–9.0 | TAS [1] |
MIGS-15 | Biotic relationship | host-associated | TAS [1] |
MIGS-14 | Known pathogenicity | none | TAS [1] |
MIGS-16 | Specific host | Prorocentrum lima ME130 | TAS [1] |
MIGS-18 | Health status of Host | not reported | |
Biosafety level | 1 | TAS [23] | |
MIGS-19 | Trophic level | not reported | |
MIGS-23.1 | Isolation | from a culture of Prorocentrum lima ME130 |
TAS [1] |
MIGS-4 | Geographic location | not reported | |
MIGS-5 | Time of sample collection | April 1, 2002 | TAS [1] |
MIGS-4.1 | Latitude | 54.133 | TAS [1] |
MIGS-4.2 | Longitude | 7.867 | TAS [1] |
MIGS-4.3 | Depth | not reported | |
MIGS-4.4 | Altitude | not reported |
Evidence codes TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [24].