Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2013 Mar 25;14:204. doi: 10.1186/1471-2164-14-204

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2013 Wenger and Galliot; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Comparative analysis of the RNAseq only and predicted-only sequences. A) Pie chart showing the distribution of the 10’597 Hydra-bo sequences not found in the genome-predicted transcriptomes, thus named “unpredicted”: 3’761 align to Hydra ESTs and/or to sequences from the AEP-454 transcriptome whereas 6’836 appear novel. B) Pie chart showing the distribution of the 11’270 genome-predicted sequences that were not found in the Hydra-bo dataset: 2’163 align to Hydra ESTs and/or to AEP-454 sequences but 9’107 sequences do not align to any expressed transcripts, thus named “predicted-only”. C) Number of Reciprocal Best Hits (RBHs) identified among predicted-only (9’107) and unpredicted (10’597) sequences when tested on a variety of opisthokont species. RBHs occurrence was assessed for Hydra-bo and predicted transcriptomes in each species individually, using whole proteomes and whole deduced proteomes. Predicted-only and unpredicted sequences corresponding to RBH orthologs were then extracted.